RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 WNT3AP56704 352 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 NR1H3Q13133 447 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 PCSK7Q16549 785 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 FSCBQ5H9T9 825 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 TPGS1Q6ZTW0 290 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 MFN1Q8IWA4 741 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 PGBD5Q8N414 524 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 SMG7Q92540 1137 aaKnown RBP19.27■□□□□ 0.67
SMC4-209ENST00000468653 USP13Q92995 863 aaPredicted RBP19.27■□□□□ 0.67
SMC4-209ENST00000468653 SELENOSQ9BQE4 189 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 DHRS4Q9BTZ2 278 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 CINPQ9BW66 212 aaPredicted RBP19.27■□□□□ 0.67
SMC4-209ENST00000468653 IL22Q9GZX6 179 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 VPS45Q9NRW7 570 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 SEPT3Q9UH03 358 aa19.27■□□□□ 0.67
SMC4-209ENST00000468653 MRPS23Q9Y3D9 190 aaKnown RBP19.27■□□□□ 0.67
SMC4-209ENST00000468653 MAGEB16A2A368 324 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 CYBBP04839 570 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 INHBAP08476 426 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 KRT15P19012 456 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 ADRA1AP35348 466 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 RFTN1Q14699 578 aaPredicted RBP19.26■□□□□ 0.67
SMC4-209ENST00000468653 MPP7Q5T2T1 576 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 ADGRD1Q6QNK2 874 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 KDELC1Q6UW63 502 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 KDELC2Q7Z4H8 507 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 C12orf76Q8N812 135 aaPredicted RBP19.26■□□□□ 0.67
SMC4-209ENST00000468653 PPM1NQ8N819 430 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 ING5Q8WYH8 240 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 MRGPRX2Q96LB1 330 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 ZMYM5Q9UJ78 669 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 VPS28Q9UK41 221 aa19.26■□□□□ 0.67
SMC4-209ENST00000468653 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.25■□□□□ 0.67
SMC4-209ENST00000468653 MZF1P28698 734 aaPredicted RBP19.25■□□□□ 0.67
SMC4-209ENST00000468653 CRYMQ14894 314 aa19.25■□□□□ 0.67
SMC4-209ENST00000468653 TERF2Q15554 542 aa19.25■□□□□ 0.67
SMC4-209ENST00000468653 TRMT10BQ6PF06 316 aaKnown RBP19.25■□□□□ 0.67
SMC4-209ENST00000468653 LRRC6Q86X45 466 aa19.25■□□□□ 0.67
SMC4-209ENST00000468653 SRRM1Q8IYB3 904 aaKnown RBP19.25■□□□□ 0.67
SMC4-209ENST00000468653 DCAKDQ8WVC6 231 aa19.25■□□□□ 0.67
SMC4-209ENST00000468653 SLC44A1Q8WWI5 657 aa19.25■□□□□ 0.67
SMC4-209ENST00000468653 SEMA3CQ99985 751 aa19.25■□□□□ 0.67
SMC4-209ENST00000468653 CNOT10Q9H9A5 744 aaKnown RBP19.25■□□□□ 0.67
SMC4-209ENST00000468653 PPANQ9NQ55 473 aaKnown RBP19.25■□□□□ 0.67
SMC4-209ENST00000468653 ACTL7AQ9Y615 435 aa19.25■□□□□ 0.67
SMC4-209ENST00000468653 RPS6KL1Q9Y6S9 549 aa19.25■□□□□ 0.67
SMC4-209ENST00000468653 CHD5Q8TDI0 1954 aa19.25■□□□□ 0.67
SMC4-209ENST00000468653 TTC24A2A3L6 582 aaPredicted RBP19.24■□□□□ 0.67
SMC4-209ENST00000468653 FOXO6A8MYZ6 492 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 MMP2P08253 660 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 CEBPBP17676 345 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 CSKP41240 450 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 PPARDQ03181 441 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 SPANXN3Q5MJ09 141 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 CES3Q6UWW8 571 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 TMC5Q6UXY8 1006 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 CYS1Q717R9 158 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 ARRDC2Q8TBH0 407 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 FEM1AQ9BSK4 669 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 CAPS2Q9BXY5 557 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 PLK2Q9NYY3 685 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 MOCS1Q9NZB8 636 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 CHD7Q9P2D1 2997 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 EPOPA6NHQ4 379 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 FAM159BA6NKW6 160 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 MUSKO15146 869 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 ALDH1A2O94788 518 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 C1QAP02745 245 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 DENND5AQ6IQ26 1287 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 RANBP10Q6VN20 620 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 SLC26A11Q86WA9 606 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 WFDC5Q8TCV5 224 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 TTC17Q96AE7 1141 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 ZNF669Q96BR6 464 aaPredicted RBP19.24■□□□□ 0.67
SMC4-209ENST00000468653 PSKH2Q96QS6 385 aa19.24■□□□□ 0.67
SMC4-209ENST00000468653 FAM237BA0A1B0GVD1 139 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 A6NNZ2 444 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 CXorf49A8MYA2 514 aaPredicted RBP19.23■□□□□ 0.67
SMC4-209ENST00000468653 SNAP91O60641 907 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 USP1O94782 785 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 PRAMEF12O95522 483 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 CBX2Q14781 532 aaPredicted RBP19.23■□□□□ 0.67
SMC4-209ENST00000468653 TUBB8Q3ZCM7 444 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 TTC19Q6DKK2 380 aaPredicted RBP19.23■□□□□ 0.67
SMC4-209ENST00000468653 TRABD2AQ86V40 505 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 CDKL2Q92772 493 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 ZSWIM3Q96MP5 696 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 MGME1Q9BQP7 344 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 SFXN1Q9H9B4 322 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 SMYD2Q9NRG4 433 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 PSD3Q9NYI0 1048 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 SOX13Q9UN79 622 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 OR51B4Q9Y5P0 310 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 ACTL7BQ9Y614 415 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 NOTCH4Q99466 2003 aa19.23■□□□□ 0.67
SMC4-209ENST00000468653 CHD9Q3L8U1 2897 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 IQANK1A0A1B0GTG1 560 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 ARF5P84085 180 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 POU6F1Q14863 301 aa19.22■□□□□ 0.67
SMC4-209ENST00000468653 ANKRD20A4Q4UJ75 823 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms