RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 ST8SIA6P61647 398 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 AP1S1P61966 158 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 ZBTB17Q13105 803 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 DHX34Q14147 1143 aaKnown RBP11.45□□□□□ -0.58
MSH5-214ENST00000468602 DLG2Q15700 870 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 EOGTQ5NDL2 527 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 C9orf64Q5T6V5 341 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 EGFLAMQ63HQ2 1017 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 TTC27Q6P3X3 843 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 CCDC137Q6PK04 289 aaKnown RBP11.45□□□□□ -0.58
MSH5-214ENST00000468602 ZC3H18Q86VM9 953 aaKnown RBP11.45□□□□□ -0.58
MSH5-214ENST00000468602 SFTPA1Q8IWL2 248 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 SPEM1Q8N4L4 309 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 MMGT1Q8N4V1 131 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 CEP112Q8N8E3 955 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 CCNYQ8ND76 341 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 TMIEQ8NEW7 156 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 OR2AP1Q8NGE2 309 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 OR2A12Q8NGT7 310 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 ARRDC2Q8TBH0 407 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 CCHCR1Q8TD31 782 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 C1orf54Q8WWF1 131 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 MAGOHBQ96A72 148 aaKnown RBP11.45□□□□□ -0.58
MSH5-214ENST00000468602 SPATA13Q96N96 652 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 NECAB3Q96P71 396 aaPredicted RBP11.45□□□□□ -0.58
MSH5-214ENST00000468602 FCRL5Q96RD9 977 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 NUDCD1Q96RS6 583 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 LRFN3Q9BTN0 628 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 CIPCQ9C0C6 399 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 POLR1EQ9GZS1 481 aaKnown RBP11.45□□□□□ -0.58
MSH5-214ENST00000468602 SLC25A51Q9H1U9 297 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 PCDH9Q9HC56 1237 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 CA14Q9ULX7 337 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 MMP17Q9ULZ9 603 aa11.45□□□□□ -0.58
MSH5-214ENST00000468602 A0A1W2PQ67 120 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 A0A1W2PQF6 199 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 TSPAN11A1L157 253 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 FAM170BA6NMN3 283 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 H7C0C1 242 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 ADAM23O75077 832 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 SOCS5O75159 536 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 STK10O94804 968 aaKnown RBP11.44□□□□□ -0.58
MSH5-214ENST00000468602 POP4O95707 220 aaKnown RBP11.44□□□□□ -0.58
MSH5-214ENST00000468602 EPOP01588 193 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 AOC1P19801 751 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 CD68P34810 354 aaPredicted RBP11.44□□□□□ -0.58
MSH5-214ENST00000468602 PTGIRP43119 386 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 ATP5OP48047 213 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 NUBP1P53384 320 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 SNRPD1P62314 119 aaKnown RBP11.44□□□□□ -0.58
MSH5-214ENST00000468602 ZBTB16Q05516 673 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 AP1B1Q10567 949 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 ELAVL3Q14576 367 aaKnown RBP11.44□□□□□ -0.58
MSH5-214ENST00000468602 LLGL1Q15334 1064 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 GLE1Q53GS7 698 aaKnown RBP11.44□□□□□ -0.58
MSH5-214ENST00000468602 CARD16Q5EG05 197 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 ANKRD20A2Q5SQ80 823 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 ANKRD20A1Q5TYW2 823 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 ANKRD20A3Q5VUR7 823 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 ARMC3Q5W041 872 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 CWF19L1Q69YN2 538 aaKnown RBP11.44□□□□□ -0.58
MSH5-214ENST00000468602 ITPRIPL1Q6GPH6 555 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 DARS2Q6PI48 645 aaKnown RBP11.44□□□□□ -0.58
MSH5-214ENST00000468602 ZNF567Q8N184 647 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 PGBD5Q8N414 524 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 ATP11CQ8NB49 1132 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 ATG4AQ8WYN0 398 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 SEC14L1Q92503 715 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 ECHDC3Q96DC8 303 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 IMP4Q96G21 291 aaKnown RBP11.44□□□□□ -0.58
MSH5-214ENST00000468602 CCDC114Q96M63 670 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 GDAP1L1Q96MZ0 367 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 TMEM121Q9BTD3 319 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 AP1M1Q9BXS5 423 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 LMAN1LQ9HAT1 526 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 RBM12Q9NTZ6 932 aaKnown RBP11.44□□□□□ -0.58
MSH5-214ENST00000468602 RBM22Q9NW64 420 aaKnown RBP eCLIP11.44□□□□□ -0.58
MSH5-214ENST00000468602 SMARCAL1Q9NZC9 954 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 SCML1Q9UN30 329 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 PPIL1Q9Y3C6 166 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 STON1Q9Y6Q2 735 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 TRIOO75962 3097 aa11.44□□□□□ -0.58
MSH5-214ENST00000468602 CCDC163A0A0D9SF12 145 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.43□□□□□ -0.58
MSH5-214ENST00000468602 FAM187AA6NFU0 413 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 ERI2A8K979 691 aaKnown RBP11.43□□□□□ -0.58
MSH5-214ENST00000468602 C10orf142B7Z368 130 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 K7ERQ8 282 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 KCNK1O00180 336 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 SMAPO00193 183 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 RNF103O00237 685 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 TRAFD1O14545 582 aaPredicted RBP11.43□□□□□ -0.58
MSH5-214ENST00000468602 MUSKO15146 869 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 KCNN4O15554 427 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 HTRA2O43464 458 aaPredicted RBP11.43□□□□□ -0.58
MSH5-214ENST00000468602 FZD6O60353 706 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 RNF40O75150 1001 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 MAP3K6O95382 1288 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 JCHAINP01591 159 aa11.43□□□□□ -0.58
MSH5-214ENST00000468602 HLA-DQB2P05538 268 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms