RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 RNGTTO60942 597 aaKnown RBP11.75□□□□□ -0.53
CDHR3-205ENST00000468143 CEACAM1P13688 526 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 ERCC2P18074 760 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 IL1R2P27930 398 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 GRIA4P48058 902 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 ADKP55263 362 aaKnown RBP11.75□□□□□ -0.53
CDHR3-205ENST00000468143 C21orf59P57076 290 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 YBEYP58557 167 aaPredicted RBP11.75□□□□□ -0.53
CDHR3-205ENST00000468143 RACK1P63244 317 aaKnown RBP11.75□□□□□ -0.53
CDHR3-205ENST00000468143 IL9RQ01113 521 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 SMTNL2Q2TAL5 461 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 ATXN7L2Q5T6C5 722 aaPredicted RBP11.75□□□□□ -0.53
CDHR3-205ENST00000468143 IL27RAQ6UWB1 636 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 ERN2Q76MJ5 926 aaKnown RBP11.75□□□□□ -0.53
CDHR3-205ENST00000468143 PIP4P1Q86T03 277 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 PRPF39Q86UA1 669 aaKnown RBP11.75□□□□□ -0.53
CDHR3-205ENST00000468143 VSTM4Q8IW00 320 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 UMODL1-AS1Q8N2C9 162 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 FNIP1Q8TF40 1166 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 HSPH1Q92598 858 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 MYOCQ99972 504 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 NUP85Q9BW27 656 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 SLC39A8Q9C0K1 460 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 TM7SF3Q9NS93 570 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 CA5BQ9Y2D0 317 aa11.75□□□□□ -0.53
CDHR3-205ENST00000468143 ADAMTS9Q9P2N4 1935 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 PCDH15Q96QU1 1955 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 DCHS1Q96JQ0 3298 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 A0A1W2PQU0 124 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 H0Y8X5 98 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 J3KR12 359 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 VILLO15195 856 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 SLC31A1O15431 190 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 FGF10O15520 208 aaPredicted RBP11.74□□□□□ -0.53
CDHR3-205ENST00000468143 TMCC1O94876 653 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 PCDH8O95206 1070 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 CER1O95813 267 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 TOP3BO95985 862 aaKnown RBP11.74□□□□□ -0.53
CDHR3-205ENST00000468143 CYP1A2P05177 515 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 PRLRP16471 622 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 CD38P28907 300 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 SSR1P43307 286 aaKnown RBP11.74□□□□□ -0.53
CDHR3-205ENST00000468143 PAPOLAP51003 745 aaKnown RBP11.74□□□□□ -0.53
CDHR3-205ENST00000468143 GEMIN4P57678 1058 aaKnown RBP11.74□□□□□ -0.53
CDHR3-205ENST00000468143 RHOAP61586 193 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 SNRPD1P62314 119 aaKnown RBP11.74□□□□□ -0.53
CDHR3-205ENST00000468143 SLC14A1Q13336 389 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 SERINC3Q13530 473 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 CYTH1Q15438 398 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 MYLK3Q32MK0 819 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 PARP15Q460N3 678 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 TXNRD3NBQ6F5E7 133 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 FBXL19Q6PCT2 694 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 RFX8Q6ZV50 586 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 OR2AP1Q8NGE2 309 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 OR8K1Q8NGG5 319 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 SETD7Q8WTS6 366 aaKnown RBP11.74□□□□□ -0.53
CDHR3-205ENST00000468143 ISG20Q96AZ6 181 aaKnown RBP11.74□□□□□ -0.53
CDHR3-205ENST00000468143 PACSIN1Q9BY11 444 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 KDM4CQ9H3R0 1056 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 LRRC19Q9H756 370 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 CWC15Q9P013 229 aaKnown RBP11.74□□□□□ -0.53
CDHR3-205ENST00000468143 ANAPC7Q9UJX3 599 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 MFHAS1Q9Y4C4 1052 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 NUMA1Q14980 2115 aa11.74□□□□□ -0.53
CDHR3-205ENST00000468143 DMXL1Q9Y485 3027 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 A0A1W2PR77 199 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 C16orf96A6NNT2 1141 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 UPK3BL1B0FP48 263 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 UPK3BL2E5RIL1 263 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 DFFAO00273 331 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 INSIG1O15503 277 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 LATO43561 262 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 POP4O95707 220 aaKnown RBP11.73□□□□□ -0.53
CDHR3-205ENST00000468143 GSRP00390 522 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 RARAP10276 462 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 ADRB3P13945 408 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 SPINK2P20155 84 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 AMPD1P23109 780 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 HNRNPH3P31942 346 aaKnown RBP11.73□□□□□ -0.53
CDHR3-205ENST00000468143 PCK1P35558 622 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 CTSKP43235 329 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 NEK3P51956 506 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 NDST2P52849 883 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 SIM1P81133 766 aaPredicted RBP11.73□□□□□ -0.53
CDHR3-205ENST00000468143 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 DNAH14Q0VDD8 3507 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 FOXC1Q12948 553 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 MAPK8IP2Q13387 824 aaPredicted RBP11.73□□□□□ -0.53
CDHR3-205ENST00000468143 PIGHQ14442 188 aaPredicted RBP11.73□□□□□ -0.53
CDHR3-205ENST00000468143 ACAP1Q15027 740 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 GON4LQ3T8J9 2241 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 SEL1L3Q68CR1 1132 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 NAPEPLDQ6IQ20 393 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 ARHGAP36Q6ZRI8 547 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 PARS2Q7L3T8 475 aaKnown RBP11.73□□□□□ -0.53
CDHR3-205ENST00000468143 TRIM69Q86WT6 500 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 CPNE8Q86YQ8 564 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 NAXDQ8IW45 347 aa11.73□□□□□ -0.53
CDHR3-205ENST00000468143 TP53INP2Q8IXH6 220 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms