RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 FBRSQ9HAH7 460 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 RBM22Q9NW64 420 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNIP1-202ENST00000468040 SMARCAL1Q9NZC9 954 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 SEPT10Q9P0V9 454 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 CDC23Q9UJX2 597 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 ZNF148Q9UQR1 794 aa15.46■□□□□ 0.07
SNIP1-202ENST00000468040 FARP1Q9Y4F1 1045 aaPredicted RBP15.46■□□□□ 0.07
SNIP1-202ENST00000468040 SHROOM3Q8TF72 1996 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 WASH3PC4AMC7 463 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 RNF103O00237 685 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 KCNN4O15554 427 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 IGSF6O95976 241 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 JCHAINP01591 159 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 HLA-EP13747 358 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 STIP1P31948 543 aaKnown RBP15.45■□□□□ 0.06
SNIP1-202ENST00000468040 WASP42768 502 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 LMNB2Q03252 620 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 NSUN2Q08J23 767 aaKnown RBP eCLIP15.45■□□□□ 0.06
SNIP1-202ENST00000468040 CAMK2GQ13555 558 aaPredicted RBP15.45■□□□□ 0.06
SNIP1-202ENST00000468040 SNX1Q13596 522 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 ELAVL3Q14576 367 aaKnown RBP15.45■□□□□ 0.06
SNIP1-202ENST00000468040 WHAMMP3Q1A5X7 153 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 CARD16Q5EG05 197 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 B4GALNT4Q76KP1 1039 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 ZNF366Q8N895 744 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 TSEN2Q8NCE0 465 aaKnown RBP15.45■□□□□ 0.06
SNIP1-202ENST00000468040 OR2AP1Q8NGE2 309 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 PTPRN2Q92932 1015 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 MAGOHBQ96A72 148 aaKnown RBP15.45■□□□□ 0.06
SNIP1-202ENST00000468040 MGME1Q9BQP7 344 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 TMEM121Q9BTD3 319 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 TM6SF2Q9BZW4 377 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 POLR1EQ9GZS1 481 aaKnown RBP15.45■□□□□ 0.06
SNIP1-202ENST00000468040 TNKS2Q9H2K2 1166 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 EPHX3Q9H6B9 360 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 LHX3Q9UBR4 397 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 TRHDEQ9UKU6 1024 aa15.45■□□□□ 0.06
SNIP1-202ENST00000468040 DRG1Q9Y295 367 aaKnown RBP15.45■□□□□ 0.06
SNIP1-202ENST00000468040 CCDC188H7C350 402 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 ALOX15BO15296 676 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 ZBTB24O43167 697 aaPredicted RBP15.44■□□□□ 0.06
SNIP1-202ENST00000468040 PHF2O75151 1096 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 SIN3BO75182 1162 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 ZNF821O75541 412 aaPredicted RBP15.44■□□□□ 0.06
SNIP1-202ENST00000468040 PTPN3P26045 913 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 CHRNA3P32297 505 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 MAPK8P45983 427 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 CSNK1DP48730 415 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 FNTAP49354 379 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 DGKEP52429 567 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 WASHC5Q12768 1159 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 ZBTB17Q13105 803 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 GAS6Q14393 721 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 CRY1Q16526 586 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 TEX44Q53QW1 395 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 RALGPS1Q5JS13 557 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 C9orf64Q5T6V5 341 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 PKN3Q6P5Z2 889 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 MAMSTRQ6ZN01 415 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 DSG4Q86SJ6 1040 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 FBXL6Q8N531 539 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 OR2A12Q8NGT7 310 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 OR8D1Q8WZ84 308 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 USP29Q9HBJ7 922 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 NT5MQ9NPB1 228 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 PRSS16Q9NQE7 514 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 DLGAP2Q9P1A6 1054 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 KLHL8Q9P2G9 620 aaPredicted RBP15.44■□□□□ 0.06
SNIP1-202ENST00000468040 FEZ2Q9UHY8 353 aaPredicted RBP15.44■□□□□ 0.06
SNIP1-202ENST00000468040 TTLL3Q9Y4R7 772 aa15.44■□□□□ 0.06
SNIP1-202ENST00000468040 A0A1W2PQF6 199 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 PDE2AO00408 941 aaPredicted RBP15.43■□□□□ 0.06
SNIP1-202ENST00000468040 PI15O43692 258 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 BNIP3LO60238 219 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 OPHN1O60890 802 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 HLA-DQB2P05538 268 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 CES1P23141 567 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 CCR3P51677 355 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 CCNHP51946 323 aaPredicted RBP15.43■□□□□ 0.06
SNIP1-202ENST00000468040 AP1S1P61966 158 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 RAD51Q06609 339 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 ITKQ08881 620 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 MTAPQ13126 283 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 DNTTIP2Q5QJE6 756 aaKnown RBP15.43■□□□□ 0.06
SNIP1-202ENST00000468040 ALG1LQ6GMV1 187 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 DPY19L3Q6ZPD9 716 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 PGBD5Q8N414 524 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 RYBPQ8N488 228 aaPredicted RBP15.43■□□□□ 0.06
SNIP1-202ENST00000468040 FAM71DQ8N9W8 422 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 OR2T3Q8NH03 318 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 RTP4Q96DX8 246 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 ZNF419Q96HQ0 510 aaPredicted RBP15.43■□□□□ 0.06
SNIP1-202ENST00000468040 LRIG1Q96JA1 1093 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 EXOC2Q96KP1 924 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 TEKT5Q96M29 485 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 SPATA13Q96N96 652 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 RUNDC3BQ96NL0 473 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 AGAP3Q96P47 875 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 NUDCD1Q96RS6 583 aa15.43■□□□□ 0.06
SNIP1-202ENST00000468040 MTG2Q9H4K7 406 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms