RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 GVINP1Q7Z2Y8 2422 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 THADAQ6YHU6 1953 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 A0A1W2PP55 124 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 GFRA3O60609 400 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 MAFKO60675 156 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 PALMO75781 387 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 PEX11BO96011 259 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 CDKN2BP42772 138 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 PEX5P50542 639 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 RPL6Q02878 288 aaKnown RBP13.84□□□□□ -0.19
SSBP1-206ENST00000467681 GALNT2Q10471 571 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 SLC10A2Q12908 348 aaPredicted RBP13.84□□□□□ -0.19
SSBP1-206ENST00000467681 ODF2Q5BJF6 829 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 NCBP2-AS2Q69YL0 99 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 SLC9A4Q6AI14 798 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 MFSD7Q6UXD7 560 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 FAM124AQ86V42 546 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 HDDC3Q8N4P3 179 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 AADATQ8N5Z0 425 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 DEFB119Q8N690 84 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 PLD5Q8N7P1 536 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 CADM4Q8NFZ8 388 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 OR2AP1Q8NGE2 309 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 EXD1Q8NHP7 514 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 RUBCNQ92622 972 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 KRT35Q92764 455 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 LRIG1Q96JA1 1093 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 ZNF599Q96NL3 588 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 TSGA13Q96PP4 275 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 OMDQ99983 421 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 TM6SF2Q9BZW4 377 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 TSGA10Q9BZW7 698 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 BTBD1Q9H0C5 482 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 SP110Q9HB58 689 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 LHX3Q9UBR4 397 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 IL36AQ9UHA7 158 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 GMEB2Q9UKD1 530 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 WASF2Q9Y6W5 498 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 PI4KAP42356 2102 aa13.84□□□□□ -0.19
SSBP1-206ENST00000467681 MUC22E2RYF6 1773 aaPredicted RBP13.83□□□□□ -0.19
SSBP1-206ENST00000467681 WDFY4Q6ZS81 3184 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 METTL12A8MUP2 240 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 C1QTNF3-AMACRE9PGA6 284 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 RNASEH2AO75792 299 aaKnown RBP13.83□□□□□ -0.2
SSBP1-206ENST00000467681 CCDC175P0C221 793 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 ZFXP17010 805 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-206ENST00000467681 MX2P20592 715 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 CTNNA2P26232 953 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 ACSL1P33121 698 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 CTNNA1P35221 906 aaKnown RBP13.83□□□□□ -0.2
SSBP1-206ENST00000467681 CSNK1DP48730 415 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 MARCKSL1P49006 195 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 DHPSP49366 369 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-206ENST00000467681 CCNHP51946 323 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-206ENST00000467681 METAP1P53582 386 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 RHOAP61586 193 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 GBE1Q04446 702 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 NSUN2Q08J23 767 aaKnown RBP eCLIP13.83□□□□□ -0.2
SSBP1-206ENST00000467681 ATXN7L2Q5T6C5 722 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-206ENST00000467681 TMCO4Q5TGY1 634 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-206ENST00000467681 SPOCD1Q6ZMY3 1216 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 NT5DC3Q86UY8 548 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 SYCE1Q8N0S2 351 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 RYBPQ8N488 228 aaPredicted RBP13.83□□□□□ -0.2
SSBP1-206ENST00000467681 UBE2Q2Q8WVN8 375 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 FOXJ1Q92949 421 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 FAM131CQ96AQ9 280 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 VOPP1Q96AW1 172 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 PDLIM2Q96JY6 352 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 GDAP1L1Q96MZ0 367 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 GPR174Q9BXC1 333 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 PCED1AQ9H1Q7 454 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 SERGEFQ9UGK8 458 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 AMFRQ9UKV5 643 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 FZD4Q9ULV1 537 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 GUCA1BQ9UMX6 200 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 PCDHGA5Q9Y5G8 931 aa13.83□□□□□ -0.2
SSBP1-206ENST00000467681 BCLAF3A2AJT9 711 aaKnown RBP13.82□□□□□ -0.2
SSBP1-206ENST00000467681 CCDC66A2RUB6 948 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 RNF103O00237 685 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 KRIT1O00522 736 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 APOL1O14791 398 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 SLC7A4O43246 635 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 KRT86O43790 486 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 MFSD11O43934 449 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 LEFTY1O75610 366 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 EPN2O95208 641 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 DRD3P35462 400 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 GARSP41250 739 aaKnown RBP13.82□□□□□ -0.2
SSBP1-206ENST00000467681 PTGER3P43115 390 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 RENBPP51606 427 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 RAD51Q06609 339 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 ZNF33AQ06730 810 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 SLC10A7Q0GE19 358 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 CCDC15Q0P6D6 951 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 CNTN1Q12860 1018 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 TFDP2Q14188 446 aa13.82□□□□□ -0.2
SSBP1-206ENST00000467681 LBRQ14739 615 aaKnown RBP13.82□□□□□ -0.2
SSBP1-206ENST00000467681 PEX26Q7Z412 305 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms