RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 KRT38O76015 456 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 HLA-DQA2P01906 255 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 TFRCP02786 760 aaKnown RBP4.05□□□□□ -1.76
VPS50-209ENST00000467326 PYGLP06737 847 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 CYP4B1P13584 511 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 ACP5P13686 325 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 TKTP29401 623 aaKnown RBP4.05□□□□□ -1.76
VPS50-209ENST00000467326 OAS2P29728 719 aaKnown RBP4.05□□□□□ -1.76
VPS50-209ENST00000467326 PNPLA4P41247 253 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 CDKN2AP42771 156 aaKnown RBP4.05□□□□□ -1.76
VPS50-209ENST00000467326 RAD52P43351 418 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 RBM5P52756 815 aaKnown RBP eCLIP4.05□□□□□ -1.76
VPS50-209ENST00000467326 ZBED6P86452 979 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 MPP1Q00013 466 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 PLIN5Q00G26 463 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 WASHC5Q12768 1159 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 SEMA3AQ14563 771 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 CCNG2Q16589 344 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 RUNDC3AQ59EK9 446 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 VWA5B1Q5TIE3 1220 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 MTFR2Q6P444 385 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 AAGABQ6PD74 315 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 CYP26C1Q6V0L0 522 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 FASTKD5Q7L8L6 764 aaKnown RBP4.05□□□□□ -1.76
VPS50-209ENST00000467326 LCA5Q86VQ0 697 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 LMNTD2Q8IXW0 634 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 NKAIN3Q8N8D7 197 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 OR6Y1Q8NGX8 325 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 CSGALNACT1Q8TDX6 532 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 AFAP1L1Q8TED9 768 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 C2CD4CQ8TF44 421 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 ZSCAN31Q96LW9 406 aaPredicted RBP4.05□□□□□ -1.76
VPS50-209ENST00000467326 FRG2BQ96QU4 278 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 IFT27Q9BW83 186 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 ACAD9Q9H845 621 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 NCKIPSDQ9NZQ3 722 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 UPB1Q9UBR1 384 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 CRYL1Q9Y2S2 319 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 TMEM98Q9Y2Y6 226 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 SLC4A4Q9Y6R1 1079 aa4.05□□□□□ -1.76
VPS50-209ENST00000467326 RRN3P2A6NIE6 340 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 LACTBL1A8MY62 500 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 DDX58O95786 925 aaKnown RBP4.04□□□□□ -1.76
VPS50-209ENST00000467326 CSF1P09603 554 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 CHN1P15882 459 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 ARRB2P32121 409 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 TNFSF8P32971 234 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 CTNNA1P35221 906 aaKnown RBP4.04□□□□□ -1.76
VPS50-209ENST00000467326 ADD2P35612 726 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 KRT20P35900 424 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 PIK3CAP42336 1068 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 KCNJ4P48050 445 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 RFX2P48378 723 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 RPS6KA3P51812 740 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 THOC5Q13769 683 aaKnown RBP4.04□□□□□ -1.76
VPS50-209ENST00000467326 GPR18Q14330 331 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 PLCB4Q15147 1175 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 PLK5Q496M5 336 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 MFSD4BQ5TF39 518 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 TMCO3Q6UWJ1 677 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 Q6ZTK2 550 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 CTU1Q7Z7A3 348 aaKnown RBP4.04□□□□□ -1.76
VPS50-209ENST00000467326 TBC1D1Q86TI0 1168 aaPredicted RBP4.04□□□□□ -1.76
VPS50-209ENST00000467326 SNX32Q86XE0 403 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 CAMK1DQ8IU85 385 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 BRSK2Q8IWQ3 736 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 FAM217AQ8IXS0 508 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 GALNT15Q8N3T1 639 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 SPATA3Q8NHX4 192 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 CCDC47Q96A33 483 aaKnown RBP4.04□□□□□ -1.76
VPS50-209ENST00000467326 KTI12Q96EK9 354 aaPredicted RBP4.04□□□□□ -1.76
VPS50-209ENST00000467326 VMP1Q96GC9 406 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 UBXN10Q96LJ8 280 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 WDR77Q9BQA1 342 aaPredicted RBP4.04□□□□□ -1.76
VPS50-209ENST00000467326 SF3B5Q9BWJ5 86 aaKnown RBP4.04□□□□□ -1.76
VPS50-209ENST00000467326 CADM1Q9BY67 442 aaKnown RBP4.04□□□□□ -1.76
VPS50-209ENST00000467326 B3GNT4Q9C0J1 378 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 ISCUQ9H1K1 167 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 HIPK3Q9H422 1215 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 PLEKHA5Q9HAU0 1116 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 PLEKHA2Q9HB19 425 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 IRAK4Q9NWZ3 460 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 ZDHHC7Q9NXF8 308 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 NKIRAS2Q9NYR9 191 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 KLQ9UEF7 1012 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 GPR52Q9Y2T5 361 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 RAP2CQ9Y3L5 183 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 INSL5Q9Y5Q6 135 aa4.04□□□□□ -1.76
VPS50-209ENST00000467326 GTPBP10A4D1E9 387 aaKnown RBP4.03□□□□□ -1.76
VPS50-209ENST00000467326 SMTNL1A8MU46 457 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 TIPRLO75663 272 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 GFPT2O94808 682 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 TMCC1O94876 653 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 BAG2O95816 211 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 TGFB3P10600 412 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 UNGP13051 313 aaPredicted RBP4.03□□□□□ -1.76
VPS50-209ENST00000467326 XBP1P17861 261 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 CCKARP32238 428 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 TSPAN7P41732 249 aa4.03□□□□□ -1.76
VPS50-209ENST00000467326 ENTPD1P49961 510 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms