RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ARL13BQ3SXY8 428 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 ARHGAP15Q53QZ3 475 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 HEPHL1Q6MZM0 1159 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 UNQ6126/PRO20091Q6UXV3 157 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 PIK3AP1Q6ZUJ8 805 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 C11orf96Q7Z7L8 435 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 DPP9Q86TI2 863 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 BRI3BPQ8WY22 251 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 GRAMD1AQ96CP6 724 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 FAR2Q96K12 515 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 GFM1Q96RP9 751 aaKnown RBP3.97□□□□□ -1.77
XRN1-206ENST00000467077 TXNRD2Q9NNW7 524 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 RGL1Q9NZL6 768 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 POLR1AO95602 1720 aaPredicted RBP3.97□□□□□ -1.77
XRN1-206ENST00000467077 MROH2AA6NES4 1674 aa3.97□□□□□ -1.77
XRN1-206ENST00000467077 CLTCQ00610 1675 aaKnown RBP3.97□□□□□ -1.77
XRN1-206ENST00000467077 NCOA1Q15788 1441 aa3.96□□□□□ -1.77
XRN1-206ENST00000467077 MYO3AQ8NEV4 1616 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 CDC42BPBQ9Y5S2 1711 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 TRBV5-7A0A0A0MS05 114 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 FAM234BA2RU67 622 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 RASA4BC9J798 803 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 M0QZQ0 153 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 RASA4O43374 803 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 ITM2AO43736 263 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 FGF18O76093 207 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 KAT7O95251 611 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 RBM6P78332 1123 aaKnown RBP3.96□□□□□ -1.78
XRN1-206ENST00000467077 LONRF1Q17RB8 773 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 SLC35G1Q2M3R5 365 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 ACCSLQ4AC99 568 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 HSP90AB2PQ58FF8 381 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 ARL13AQ5H913 290 aaPredicted RBP3.96□□□□□ -1.78
XRN1-206ENST00000467077 FAM209BQ5JX69 171 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 TMEM71Q6P5X7 295 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 MARK2Q7KZI7 788 aaKnown RBP3.96□□□□□ -1.78
XRN1-206ENST00000467077 KLBQ86Z14 1044 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 GLIS1Q8NBF1 620 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 ZNF333Q96JL9 665 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 CCDC136Q96JN2 1154 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 RIPOR3Q96MK2 946 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.96□□□□□ -1.788e-7■■■□□ 18.5
XRN1-206ENST00000467077 OSBPL5Q9H0X9 879 aaPredicted RBP3.96□□□□□ -1.78
XRN1-206ENST00000467077 ACTR5Q9H9F9 607 aaPredicted RBP3.96□□□□□ -1.78
XRN1-206ENST00000467077 FBXO4Q9UKT5 387 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 PRXQ9BXM0 1461 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 DIP2CQ9Y2E4 1556 aa3.96□□□□□ -1.78
XRN1-206ENST00000467077 ZNF142P52746 1687 aaPredicted RBP3.96□□□□□ -1.78
XRN1-206ENST00000467077 TRAPPC8Q9Y2L5 1435 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 ITSN2Q9NZM3 1697 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 ZNF518AQ6AHZ1 1483 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 KCNJ18B7U540 433 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 P2RY10O00398 339 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 SYT5O00445 386 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 CAND2O75155 1236 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 ALDOAP04075 364 aaKnown RBP3.95□□□□□ -1.78
XRN1-206ENST00000467077 NBPF7P0C2Y1 421 aaPredicted RBP3.95□□□□□ -1.78
XRN1-206ENST00000467077 HSPA1LP34931 641 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 CDKN1AP38936 164 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 THPOP40225 353 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 MAPKAPK3Q16644 382 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 MON1BQ7L1V2 547 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 OR2C3Q8N628 320 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 HORMAD2Q8N7B1 307 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 PARD3BQ8TEW8 1205 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 ZNF566Q969W8 418 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 PYGO2Q9BRQ0 406 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 NUDT22Q9BRQ3 303 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 BARHL1Q9BZE3 327 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 LRRIQ1Q96JM4 1722 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 KIF14Q15058 1648 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 ARHGAP5Q13017 1502 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 CDK13Q14004 1512 aaKnown RBP3.95□□□□□ -1.78
XRN1-206ENST00000467077 PLCH2O75038 1416 aa3.95□□□□□ -1.78
XRN1-206ENST00000467077 KIDINS220Q9ULH0 1771 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 KDM5CP41229 1560 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 REREQ9P2R6 1566 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 PRC1O43663 620 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 FGF17O60258 216 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 VIPP01282 170 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 MYZAPP0CAP1 466 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 EEF1GP26641 437 aaKnown RBP3.94□□□□□ -1.78
XRN1-206ENST00000467077 KLRC2P26717 231 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 HSD17B4P51659 736 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 IZUMO3Q5VZ72 239 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 FBXO38Q6PIJ6 1188 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 TUBA1AQ71U36 451 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 AFAP1Q8N556 730 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 SORCS1Q8WY21 1168 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 NPIPB3Q92617 1050 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 TUBA1CQ9BQE3 449 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 MOV10L1Q9BXT6 1211 aaKnown RBP3.94□□□□□ -1.78
XRN1-206ENST00000467077 PHTF1Q9UMS5 762 aa3.94□□□□□ -1.78
XRN1-206ENST00000467077 C3orf70A6NLC5 250 aaPredicted RBP3.93□□□□□ -1.78
XRN1-206ENST00000467077 DHHO43323 396 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 TOM1O60784 492 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 SLC22A3O75751 556 aa3.93□□□□□ -1.78
XRN1-206ENST00000467077 AFPP02771 609 aaKnown RBP3.93□□□□□ -1.78
XRN1-206ENST00000467077 KRT18P05783 430 aaKnown RBP3.93□□□□□ -1.78
XRN1-206ENST00000467077 MYL1P05976 194 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms