RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 DUX5Q96PT3 197 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 TEFMQ96QE5 360 aaKnown RBP3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 HERC2P3Q9BVR0 1158 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 IFT27Q9BW83 186 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 ELAC1Q9H777 363 aaKnown RBP3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 SDF2L1Q9HCN8 221 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 CHST12Q9NRB3 414 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 NDUFAF4Q9P032 175 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 HDAC6Q9UBN7 1215 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 KLQ9UEF7 1012 aa3.15□□□□□ -1.91
GTF3C3-209ENST00000466862 ACKR2O00590 384 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 TIMM23O14925 209 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 HNRNPRO43390 633 aaKnown RBP3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 BUB3O43684 328 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 F7P08709 466 aaPredicted RBP3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 DAOP14920 347 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 SNTA1Q13424 505 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 PICALMQ13492 652 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 RPE65Q16518 533 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 PFKFB4Q16877 469 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 TANGO2Q6ICL3 276 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 MON1BQ7L1V2 547 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 RASGRP2Q7LDG7 609 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 PATL1Q86TB9 770 aaKnown RBP3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 FOXP4Q8IVH2 680 aaPredicted RBP3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 CPT1BQ92523 772 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 ADGRG7Q96K78 797 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 NODALQ96S42 347 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 DDX23Q9BUQ8 820 aaKnown RBP3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 CADM1Q9BY67 442 aaKnown RBP3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 NPFFR1Q9GZQ6 430 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 LHPPQ9H008 270 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 RETREG1Q9H6L5 497 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 ACAD9Q9H845 621 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 GRHL1Q9NZI5 618 aa3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 HERC5Q9UII4 1024 aaKnown RBP3.14□□□□□ -1.91
GTF3C3-209ENST00000466862 IGLV2-11P01706 119 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 SP1P08047 785 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 CSF1P09603 554 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 CYP4B1P13584 511 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 SERPINB3P29508 390 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 C21orf33P30042 268 aaPredicted RBP3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 DPP6P42658 865 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 MTNR1AP48039 350 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 MVDP53602 400 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 TBX4P57082 545 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 POU3F1Q03052 451 aaPredicted RBP3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 RBM39Q14498 530 aaKnown RBP3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 MRGPRG-AS1Q2M3A8 158 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 LRRC24Q50LG9 513 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 ATPAF1Q5TC12 328 aaPredicted RBP3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 FAM69BQ5VUD6 431 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 FAM186BQ8IYM0 893 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 RFWD2Q8NHY2 731 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 GFM1Q96RP9 751 aaKnown RBP3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 WDR12Q9GZL7 423 aaKnown RBP3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 CXorf56Q9H5V9 222 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 NLRC4Q9NPP4 1024 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 G6PC2Q9NQR9 355 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 TMLHEQ9NVH6 421 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 GEMIN8Q9NWZ8 242 aaKnown RBP3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 DONSONQ9NYP3 566 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 LRFN1Q9P244 771 aa3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 MORC2Q9Y6X9 1032 aaPredicted RBP3.13□□□□□ -1.91
GTF3C3-209ENST00000466862 IGLV5-37A0A075B6J1 123 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 TARSL2A2RTX5 802 aaKnown RBP3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 TULP2O00295 520 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 SYN3O14994 580 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 ITM2AO43736 263 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 CAND2O75155 1236 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 SKAP2O75563 359 aaPredicted RBP3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 SERPINI2O75830 405 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 AFPP02771 609 aaKnown RBP3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 MYL1P05976 194 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 CKMT1AP12532 417 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 GJC1P36383 396 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 GLIPR1P48060 266 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 RPS6KA3P51812 740 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 FAM27E3Q08E93 113 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 MYBPHQ13203 477 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 THOC5Q13769 683 aaKnown RBP3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 PALB2Q86YC2 1186 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 NAGSQ8N159 534 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 ZNF527Q8NB42 609 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 TXNDC15Q96J42 360 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 TNIP3Q96KP6 325 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 IL17FQ96PD4 163 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 INPP4AQ96PE3 977 aaPredicted RBP3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 RMDN3Q96TC7 470 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 MVB12BQ9H7P6 319 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 WDR6Q9NNW5 1121 aaKnown RBP3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 ARFGAP3Q9NP61 516 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 THAP1Q9NVV9 213 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 FBXO40Q9UH90 709 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 KCND3Q9UK17 655 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 ADAM18Q9Y3Q7 739 aa3.12□□□□□ -1.91
GTF3C3-209ENST00000466862 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
GTF3C3-209ENST00000466862 H0Y3Z8 333 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms