RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CLCC1Q96S66 551 aa8.82□□□□□ -1
HPS4-209ENST00000466781 CDC42EP4Q9H3Q1 356 aaKnown RBP8.82□□□□□ -1
HPS4-209ENST00000466781 CDHR5Q9HBB8 845 aa8.82□□□□□ -1
HPS4-209ENST00000466781 CYLDQ9NQC7 956 aa8.82□□□□□ -1
HPS4-209ENST00000466781 RABGEF1Q9UJ41 708 aa8.82□□□□□ -1
HPS4-209ENST00000466781 PSMD7P51665 324 aa8.81□□□□□ -1
HPS4-209ENST00000466781 MYBPC1Q00872 1141 aa8.81□□□□□ -1
HPS4-209ENST00000466781 RHAGQ02094 409 aa8.81□□□□□ -1
HPS4-209ENST00000466781 EARS2Q5JPH6 523 aaKnown RBP8.81□□□□□ -1
HPS4-209ENST00000466781 MZT2AQ6P582 158 aa8.81□□□□□ -1
HPS4-209ENST00000466781 KYQ8NBH2 561 aa8.81□□□□□ -1
HPS4-209ENST00000466781 COPS5Q92905 334 aa8.81□□□□□ -1
HPS4-209ENST00000466781 LRRC39Q96DD0 335 aa8.81□□□□□ -1
HPS4-209ENST00000466781 SPATA5L1Q9BVQ7 753 aa8.81□□□□□ -1
HPS4-209ENST00000466781 TTLL2Q9BWV7 592 aa8.81□□□□□ -1
HPS4-209ENST00000466781 KLHL25Q9H0H3 589 aa8.81□□□□□ -1
HPS4-209ENST00000466781 ATP13A3Q9H7F0 1226 aa8.81□□□□□ -1
HPS4-209ENST00000466781 TPRKBQ9Y3C4 175 aa8.81□□□□□ -1
HPS4-209ENST00000466781 TNPO3Q9Y5L0 923 aaKnown RBP8.81□□□□□ -1
HPS4-209ENST00000466781 NRXN3Q9Y4C0 1643 aa8.81□□□□□ -1
HPS4-209ENST00000466781 MCIDASD6RGH6 385 aa8.81□□□□□ -1
HPS4-209ENST00000466781 ADH1AP07327 375 aa8.81□□□□□ -1
HPS4-209ENST00000466781 EPORP19235 508 aa8.81□□□□□ -1
HPS4-209ENST00000466781 SP100P23497 879 aaPredicted RBP8.81□□□□□ -1
HPS4-209ENST00000466781 HK2P52789 917 aa8.81□□□□□ -1
HPS4-209ENST00000466781 BNC1Q01954 994 aa8.81□□□□□ -1
HPS4-209ENST00000466781 SRSF11Q05519 484 aaKnown RBP8.81□□□□□ -1
HPS4-209ENST00000466781 NDUFA5Q16718 116 aa8.81□□□□□ -1
HPS4-209ENST00000466781 PLEKHA7Q6IQ23 1121 aa8.81□□□□□ -1
HPS4-209ENST00000466781 PAGE2Q7Z2X7 111 aa8.81□□□□□ -1
HPS4-209ENST00000466781 PROSER1Q86XN7 944 aa8.81□□□□□ -1
HPS4-209ENST00000466781 ENKURQ8TC29 256 aa8.81□□□□□ -1
HPS4-209ENST00000466781 PEAK1Q9H792 1746 aa8.81□□□□□ -1
HPS4-209ENST00000466781 RBM7Q9Y580 266 aaKnown RBP8.81□□□□□ -1
HPS4-209ENST00000466781 INPP4BO15327 924 aa8.81□□□□□ -1
HPS4-209ENST00000466781 KIF1CO43896 1103 aaKnown RBP8.81□□□□□ -1
HPS4-209ENST00000466781 SERPINE1P05121 402 aa8.81□□□□□ -1
HPS4-209ENST00000466781 PAEPP09466 180 aa8.81□□□□□ -1
HPS4-209ENST00000466781 ETS1P14921 441 aa8.81□□□□□ -1
HPS4-209ENST00000466781 NQO1P15559 274 aaKnown RBP8.81□□□□□ -1
HPS4-209ENST00000466781 UBA1P22314 1058 aaKnown RBP8.81□□□□□ -1
HPS4-209ENST00000466781 RPL4P36578 427 aaKnown RBP8.81□□□□□ -1
HPS4-209ENST00000466781 POLD2P49005 469 aa8.81□□□□□ -1
HPS4-209ENST00000466781 RBBP4Q09028 425 aa8.81□□□□□ -1
HPS4-209ENST00000466781 KDM7AQ6ZMT4 941 aa8.81□□□□□ -1
HPS4-209ENST00000466781 ZNF248Q8NDW4 579 aa8.81□□□□□ -1
HPS4-209ENST00000466781 ZSWIM2Q8NEG5 633 aa8.81□□□□□ -1
HPS4-209ENST00000466781 KCNN2Q9H2S1 579 aa8.81□□□□□ -1
HPS4-209ENST00000466781 RPTORQ8N122 1335 aa8.81□□□□□ -1
HPS4-209ENST00000466781 CLUP10909 449 aa8.81□□□□□ -1
HPS4-209ENST00000466781 MAPK8P45983 427 aa8.81□□□□□ -1
HPS4-209ENST00000466781 TSC22D1Q15714 1073 aa8.81□□□□□ -1
HPS4-209ENST00000466781 FAM187BQ17R55 369 aa8.81□□□□□ -1
HPS4-209ENST00000466781 USP41Q3LFD5 358 aa8.81□□□□□ -1
HPS4-209ENST00000466781 HYIQ5T013 277 aa8.81□□□□□ -1
HPS4-209ENST00000466781 DNAAF5Q86Y56 855 aa8.81□□□□□ -1
HPS4-209ENST00000466781 MTMR14Q8NCE2 650 aa8.81□□□□□ -1
HPS4-209ENST00000466781 OR10G6Q8NH81 332 aa8.81□□□□□ -1
HPS4-209ENST00000466781 ZNF354BQ96LW1 612 aa8.81□□□□□ -1
HPS4-209ENST00000466781 KCNF1Q9H3M0 494 aa8.81□□□□□ -1
HPS4-209ENST00000466781 MAT2BQ9NZL9 334 aa8.81□□□□□ -1
HPS4-209ENST00000466781 PHRF1Q9P1Y6 1649 aaKnown RBP8.81□□□□□ -1
HPS4-209ENST00000466781 BCL9LQ86UU0 1499 aa8.81□□□□□ -1
HPS4-209ENST00000466781 QSOX1O00391 747 aa8.81□□□□□ -1
HPS4-209ENST00000466781 PDE9AO76083 593 aa8.81□□□□□ -1
HPS4-209ENST00000466781 VAPBO95292 243 aa8.81□□□□□ -1
HPS4-209ENST00000466781 FGF19O95750 216 aa8.81□□□□□ -1
HPS4-209ENST00000466781 IL1BP01584 269 aa8.81□□□□□ -1
HPS4-209ENST00000466781 DNTTP04053 509 aa8.81□□□□□ -1
HPS4-209ENST00000466781 RARGP13631 454 aa8.81□□□□□ -1
HPS4-209ENST00000466781 PRG2P13727 222 aa8.81□□□□□ -1
HPS4-209ENST00000466781 NEK3P51956 506 aa8.81□□□□□ -1
HPS4-209ENST00000466781 KCNMA1Q12791 1236 aa8.81□□□□□ -1
HPS4-209ENST00000466781 INTS11Q5TA45 600 aaKnown RBP8.81□□□□□ -1
HPS4-209ENST00000466781 DNAJC14Q6Y2X3 702 aaPredicted RBP8.81□□□□□ -1
HPS4-209ENST00000466781 MCOLN2Q8IZK6 566 aa8.81□□□□□ -1
HPS4-209ENST00000466781 ITFG1Q8TB96 612 aa8.81□□□□□ -1
HPS4-209ENST00000466781 NEK7Q8TDX7 302 aa8.81□□□□□ -1
HPS4-209ENST00000466781 CENPIQ92674 756 aaPredicted RBP8.81□□□□□ -1
HPS4-209ENST00000466781 MLPHQ9BV36 600 aaPredicted RBP8.81□□□□□ -1
HPS4-209ENST00000466781 ZMYND8Q9ULU4 1186 aaPredicted RBP8.81□□□□□ -1
HPS4-209ENST00000466781 ANGPT4Q9Y264 503 aa8.81□□□□□ -1
HPS4-209ENST00000466781 SLC27A6Q9Y2P4 619 aa8.81□□□□□ -1
HPS4-209ENST00000466781 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.8□□□□□ -1
HPS4-209ENST00000466781 MAGEC1O60732 1142 aa8.8□□□□□ -1
HPS4-209ENST00000466781 TIPRLO75663 272 aa8.8□□□□□ -1
HPS4-209ENST00000466781 PDE5AO76074 875 aa8.8□□□□□ -1
HPS4-209ENST00000466781 CCNIQ14094 377 aa8.8□□□□□ -1
HPS4-209ENST00000466781 NAA30Q147X3 362 aaPredicted RBP8.8□□□□□ -1
HPS4-209ENST00000466781 RAP1GAP2Q684P5 730 aa8.8□□□□□ -1
HPS4-209ENST00000466781 ESRP1Q6NXG1 681 aaKnown RBP8.8□□□□□ -1
HPS4-209ENST00000466781 BHLHB9Q6PI77 547 aa8.8□□□□□ -1
HPS4-209ENST00000466781 EIF3MQ7L2H7 374 aaKnown RBP8.8□□□□□ -1
HPS4-209ENST00000466781 METTL3Q86U44 580 aaKnown RBP8.8□□□□□ -1
HPS4-209ENST00000466781 MTDHQ86UE4 582 aaKnown RBP8.8□□□□□ -1
HPS4-209ENST00000466781 DENND1CQ8IV53 801 aa8.8□□□□□ -1
HPS4-209ENST00000466781 DEFB107AQ8IZN7 70 aa8.8□□□□□ -1
HPS4-209ENST00000466781 SMYD1Q8NB12 490 aa8.8□□□□□ -1
HPS4-209ENST00000466781 EEF1AKMT1Q8WVE0 214 aa8.8□□□□□ -1
HPS4-209ENST00000466781 TATDN2Q93075 761 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms