RNA–Protein interactions for RNA: ENST00000466519.5

SEC22A-202, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22A, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-202ENST00000466519 URB1O60287 2271 aaKnown RBP6.3□□□□□ -1.4
SEC22A-202ENST00000466519 TNRC6BQ9UPQ9 1833 aaKnown RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 TENM4Q6N022 2769 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 GON4LQ3T8J9 2241 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 ASXL3Q9C0F0 2248 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 A0A1W2PR77 199 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 LRRC72A6NJI9 287 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 TLR4O00206 839 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 MT-CO3P00414 261 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 RPN1P04843 607 aaKnown RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 ATP5BP06576 529 aaKnown RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 PABPC1P11940 636 aaKnown RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 C6P13671 934 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 CD96P40200 585 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 RXRGP48443 463 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 HARS2P49590 506 aaKnown RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 ZNF165P49910 485 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 UCNP55089 124 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 TMPRSS3P57727 454 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 ASIC1P78348 528 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 AMPD3Q01432 767 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 LY6DQ14210 128 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 KCNJ12Q14500 433 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 RABEP1Q15276 862 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 FAM26FQ5R3K3 315 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 SFMBT2Q5VUG0 894 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 CDKAL1Q5VV42 579 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 BROXQ5VW32 411 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 MBLAC2Q68D91 279 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 FAM173BQ6P4H8 233 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 NCEH1Q6PIU2 408 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 KDM7AQ6ZMT4 941 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 RSRC2Q7L4I2 434 aaKnown RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 KIAA0907Q7Z7F0 614 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 C12orf56Q8IXR9 622 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 ZC3H3Q8IXZ2 948 aaKnown RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 PHACTR4Q8IZ21 702 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 AHI1Q8N157 1196 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 ARHGAP18Q8N392 663 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 WFIKKN2Q8TEU8 576 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 RFFLQ8WZ73 363 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 TAF4BQ92750 862 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 MRRFQ96E11 262 aaKnown RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 HIC2Q96JB3 615 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 SERAC1Q96JX3 654 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 ZNF578Q96N58 590 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 DUSP16Q9BY84 665 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 RSPH9Q9H1X1 276 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 NEUROG2Q9H2A3 272 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 TNMDQ9H2S6 317 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 PABPC3Q9H361 631 aaKnown RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 MTG2Q9H4K7 406 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 CGNQ9P2M7 1197 aaKnown RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 SERGEFQ9UGK8 458 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 GGA2Q9UJY4 613 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 SCML1Q9UN30 329 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.29□□□□□ -1.4
SEC22A-202ENST00000466519 CFAP46Q8IYW2 2715 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 KIAA1549LQ6ZVL6 1849 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 ZNF462Q96JM2 2506 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 PTPRDP23468 1912 aa6.29□□□□□ -1.4
SEC22A-202ENST00000466519 MAST4O15021 2626 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 VPS37CA5D8V6 355 aaPredicted RBP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 H3BS24 57 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 BIN1O00499 593 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 MID1O15344 667 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 PAX4O43316 350 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 SLC28A2O43868 658 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 RNASEH1O60930 286 aaKnown RBP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 RNASEH2AO75792 299 aaKnown RBP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 ASS1P00966 412 aaKnown RBP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 MPOP05164 745 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 HSP90AA1P07900 732 aaKnown RBP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 JUNBP17275 347 aaPredicted RBP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 POLR2EP19388 210 aaKnown RBP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 ACP1P24666 158 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 CCR5P51681 352 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 NXPH1P58417 271 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 ZNF445P59923 1031 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 YWHAGP61981 247 aaKnown RBP eCLIP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 DLG4P78352 724 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 E2F1Q01094 437 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 INCA1Q0VD86 236 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 SLC39A14Q15043 492 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 CST6Q15828 149 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 KNOP1Q1ED39 458 aaKnown RBP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 HNRNPA1L2Q32P51 320 aaKnown RBP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 ZACNQ401N2 412 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 SLC45A4Q5BKX6 768 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 ADGRF1Q5T601 910 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 SPOPLQ6IQ16 392 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 CNNM4Q6P4Q7 775 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 KANSL1Q7Z3B3 1105 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 SLITRK4Q8IW52 837 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 DHX40Q8IX18 779 aaKnown RBP6.28□□□□□ -1.4
SEC22A-202ENST00000466519 LSMEM2Q8N112 164 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 OR2T34Q8NGX1 318 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 NKD1Q969G9 470 aa6.28□□□□□ -1.4
SEC22A-202ENST00000466519 SNX21Q969T3 373 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms