RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 ALAS1P13196 640 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CPA3P15088 417 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 TRIM21P19474 475 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 AOC1P19801 751 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ATP6V1C1P21283 382 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CALB2P22676 271 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CALML3P27482 149 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CCT6AP40227 531 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 TSPAN7P41732 249 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CCR10P46092 362 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ACLYP53396 1101 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 STX17P56962 302 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 SESN2P58004 480 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 HTRA4P83105 476 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 GUCY2DQ02846 1103 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 DLX2Q07687 328 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 GALNT1Q10472 559 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 DYNC1I2Q13409 638 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 IL10RAQ13651 578 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 STILQ15468 1287 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CYP1B1Q16678 543 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 GSTA3Q16772 222 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ZCWPW2Q504Y3 356 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 SLC44A4Q53GD3 710 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 EARS2Q5JPH6 523 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 WDR45BQ5MNZ6 344 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ANKRD20A2Q5SQ80 823 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 N4BP2L1Q5TBK1 243 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 ANKRD20A1Q5TYW2 823 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ANKRD20A3Q5VUR7 823 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 FAM91A1Q658Y4 838 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 DUPD1Q68J44 220 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 OR52E8Q6IFG1 317 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ANO7Q6IWH7 933 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 IRGCQ6NXR0 463 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CNKSR3Q6P9H4 555 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ZPBP2Q6X784 338 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 RINLQ6ZS11 566 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 NEK10Q6ZWH5 1172 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 TMTC3Q6ZXV5 915 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 HEATR3Q7Z4Q2 680 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 LRRTM4Q86VH4 590 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CEP57Q86XR8 500 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 GSPT2Q8IYD1 628 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 UBALD2Q8IYN6 164 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 LRRC43Q8N309 656 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 FAM26EQ8N5C1 309 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 SMRP1Q8NCR6 262 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 STKLD1Q8NE28 680 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CAGE1Q8TC20 777 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ZNF398Q8TD17 642 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ATP8B4Q8TF62 1192 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 TMEM174Q8WUU8 243 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 RSC1A1Q92681 617 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 SLCO2A1Q92959 643 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 STAMBPL1Q96FJ0 436 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 HES6Q96HZ4 224 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 IFT74Q96LB3 600 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 RUNDC3BQ96NL0 473 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 HAPLN3Q96S86 360 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 DMRTA2Q96SC8 542 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 PAIP2Q9BPZ3 127 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 TRIM54Q9BYV2 358 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 TRIM9Q9C026 710 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 STMN4Q9H169 189 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 LRMDAQ9H2I8 198 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 PABPC3Q9H361 631 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 NSUN3Q9H649 340 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 C17orf75Q9HAS0 396 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 RNPEPL1Q9HAU8 725 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 SAYSD1Q9NPB0 183 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 INCENPQ9NQS7 918 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 PAPOLBQ9NRJ5 636 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 ZDHHC18Q9NUE0 388 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.58□□□□□ -1.84
SORT1-202ENST00000466471 NSMCE4AQ9NXX6 385 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 GALNT8Q9NY28 637 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 DTLQ9NZJ0 730 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ADAM22Q9P0K1 906 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CEP72Q9P209 647 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CPSF2Q9P2I0 782 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 WDR35Q9P2L0 1181 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 DNAJB4Q9UDY4 337 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 LRWD1Q9UFC0 647 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CIDEBQ9UHD4 219 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CD207Q9UJ71 328 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 ZDHHC8Q9ULC8 765 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 TMCO1Q9UM00 188 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 CTNND2Q9UQB3 1225 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 SSX2IPQ9Y2D8 614 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 USP15Q9Y4E8 981 aaPredicted RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 PCDHA3Q9Y5H8 950 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 RAI2Q9Y5P3 530 aa3.58□□□□□ -1.84
SORT1-202ENST00000466471 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.58□□□□□ -1.84
SORT1-202ENST00000466471 A0A087X0M5 115 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 A0A1B0GX30 115 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 EME2A4GXA9 379 aaPredicted RBP3.57□□□□□ -1.84
SORT1-202ENST00000466471 LINC01553A4QN01 128 aa3.57□□□□□ -1.84
SORT1-202ENST00000466471 FITM1A5D6W6 292 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms