RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 TMTC3Q6ZXV5 915 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 CYB5R4Q7L1T6 521 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 R3HCC1LQ7Z5L2 792 aaKnown RBP2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 IGFN1Q86VF2 1251 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 WDR5BQ86VZ2 330 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 GPSM1Q86YR5 675 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 TMC8Q8IU68 726 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 ADGRF4Q8IZF3 695 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 C11orf65Q8NCR3 313 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 MCPH1Q8NEM0 835 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 TDRD7Q8NHU6 1098 aaKnown RBP2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 MPLKIPQ8TAP9 179 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 BICD2Q8TD16 824 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 CENPIQ92674 756 aaPredicted RBP2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 HDAC2Q92769 488 aaKnown RBP2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 SNAPC3Q92966 411 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 EME1Q96AY2 570 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 GLIS2Q9BZE0 524 aaPredicted RBP2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 CXorf56Q9H5V9 222 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 MAP6D1Q9H9H5 199 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 TMEM184CQ9NVA4 438 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 MSRB1Q9NZV6 116 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 PTGFRNQ9P2B2 879 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 ARHGAP26Q9UNA1 814 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 DHDHQ9UQ10 334 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 SLC4A4Q9Y6R1 1079 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 RUSC2Q8N2Y8 1516 aa2.05□□□□□ -2.08
NUCKS1-202ENST00000464938 A0A1W2PPH5 198 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 DPPA5A6NC42 116 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 NPIPB15A6NHN6 443 aaPredicted RBP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 A6NNC1 897 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 KCNU1A8MYU2 1149 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 HSPB6O14558 160 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TSPAN4O14817 238 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 MDM4O15151 490 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 LDLRAD4O15165 306 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 KIF1CO43896 1103 aaKnown RBP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 CEP104O60308 925 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 HBP1O60381 514 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TMCC1O94876 653 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 RTN3O95197 1032 aaPredicted RBP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 EPN2O95208 641 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 CLEC3BP05452 202 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 MYZAPP0CAP1 466 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TNFRSF1BP20333 461 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 KLRC2P26717 231 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 YWHAQP27348 245 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TNFSF8P32971 234 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 MAN1A1P33908 653 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 RGS2P41220 211 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 ARHGAP25P42331 645 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 DPP6P42658 865 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 CXCR3P49682 368 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 RASSF2P50749 326 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 CLCNKBP51801 687 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 EFNA5P52803 228 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 ARSFP54793 590 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 GEMIN4P57678 1058 aaKnown RBP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 DCAF7P61962 342 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 ZNF91Q05481 1191 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TDGQ13569 410 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TSTQ16762 297 aaKnown RBP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 ME3Q16798 604 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 MTX3Q5HYI7 312 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 C6orf10Q5SRN2 563 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 GPATCH4Q5T3I0 446 aaKnown RBP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 FAM69AQ5T7M9 428 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 ATG9BQ674R7 924 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 ZNF626Q68DY1 528 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TXNDC8Q6A555 127 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 FAAH2Q6GMR7 532 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 FAM180BQ6P0A1 224 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TMEM81Q6P7N7 255 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TMED8Q6PL24 325 aaPredicted RBP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 SLC2A7Q6PXP3 512 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 SLC22A25Q6T423 547 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 IL20RBQ6UXL0 311 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 DLK2Q6UY11 383 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 RSRC2Q7L4I2 434 aaKnown RBP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 MAATS1Q7Z4T9 603 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 C1QL2Q7Z5L3 287 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 SERPINA11Q86U17 422 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 FAM185AQ8N0U4 392 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 RBFAQ8N0V3 343 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TEX45Q8NA69 505 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TMEM163Q8TC26 289 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 CREB3L4Q8TEY5 395 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TREX2Q9BQ50 279 aaPredicted RBP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TRMOQ9BU70 441 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TTYH1Q9H313 450 aaPredicted RBP2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 PLEKHA4Q9H4M7 779 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 KLHL31Q9H511 634 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 TAS2R10Q9NYW0 307 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 NCKIPSDQ9NZQ3 722 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 MPP6Q9NZW5 540 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 KIAA1456Q9P272 454 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 PEMTQ9UBM1 199 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 HEY2Q9UBP5 337 aa2.04□□□□□ -2.08
NUCKS1-202ENST00000464938 SEL1LQ9UBV2 794 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms