RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.29
XRN1-203ENST00000463916 FRYQ5TBA9 3013 aa13.21□□□□□ -0.3
XRN1-203ENST00000463916 EEF2KO00418 725 aaKnown RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 KCNK3O14649 394 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 FGF10O15520 208 aaPredicted RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 LATO43561 262 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 BUB1O43683 1085 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 CD59P13987 128 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 PCK1P35558 622 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 CCR5P51681 352 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 YBEYP58557 167 aaPredicted RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 HLA-BQ31612 363 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 RFX8Q6ZV50 586 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 ZNF354CQ86Y25 554 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 DEFB124Q8NES8 71 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 ISG20Q96AZ6 181 aaKnown RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 OSGEPQ9NPF4 335 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 ABHD10Q9NUJ1 306 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 CWC15Q9P013 229 aaKnown RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 ANAPC7Q9UJX3 599 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 ANKRD6Q9Y2G4 727 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 SNX11Q9Y5W9 270 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 CXorf51AA0A1B0GTR3 108 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 J3KR12 359 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 SLC7A4O43246 635 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 OPHN1O60890 802 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 PRNPP04156 253 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 WNT1P04628 370 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 ERCC2P18074 760 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 RECQLP46063 649 aaPredicted RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 NOVA1P51513 510 aaKnown RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 SLC18A3Q16572 532 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 ATXN7L2Q5T6C5 722 aaPredicted RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 N4BP2L1Q5TBK1 243 aaPredicted RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 PIP4P1Q86T03 277 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 TP53INP2Q8IXH6 220 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 NPWQ8N729 165 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 CAMK1GQ96NX5 476 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 HEPHQ9BQS7 1158 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 ZDHHC5Q9C0B5 715 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 SLC39A8Q9C0K1 460 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 GAREM1Q9H706 876 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 FNDC3AQ9Y2H6 1198 aaKnown RBP13.2□□□□□ -0.3
XRN1-203ENST00000463916 MFHAS1Q9Y4C4 1052 aa13.2□□□□□ -0.3
XRN1-203ENST00000463916 MFAP3LO75121 409 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 TMCC1O94876 653 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 RARAP10276 462 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 HTR7P34969 479 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 GRIA4P48058 902 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 RACK1P63244 317 aaKnown RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 SLC25A11Q02978 314 aaKnown RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 TRIM14Q14142 442 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 PIGHQ14442 188 aaPredicted RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 ACAP1Q15027 740 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 PARP15Q460N3 678 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 PSTKQ8IV42 348 aaKnown RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 ARHGAP12Q8IWW6 846 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 PLPP6Q8IY26 295 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 NIPA2Q8N8Q9 360 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 KDM4CQ9H3R0 1056 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 ZDHHC6Q9H6R6 413 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 ZWILCHQ9H900 591 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 PCNX2A6NKB5 2137 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 EIF3CLB5ME19 914 aaKnown RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 ADRB1P08588 477 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 CSRP1P21291 193 aaKnown RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 PAPOLAP51003 745 aaKnown RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 GEMIN4P57678 1058 aaKnown RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 FAM193AP78312 1265 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 DPYSQ14117 519 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 CYTH1Q15438 398 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 DPYSL2Q16555 572 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 PRAMEF14Q5SWL7 426 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 AFMIDQ63HM1 303 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 ERN2Q76MJ5 926 aaKnown RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 RYBPQ8N488 228 aaPredicted RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 OR2AP1Q8NGE2 309 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 HSPH1Q92598 858 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 SERAC1Q96JX3 654 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 EIF3CQ99613 913 aaKnown RBP13.19□□□□□ -0.3
XRN1-203ENST00000463916 HDAC8Q9BY41 377 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 PDFQ9HBH1 243 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.19□□□□□ -0.3
XRN1-203ENST00000463916 ETNK2Q9NVF9 386 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 IP6K2Q9UHH9 426 aa13.19□□□□□ -0.3
XRN1-203ENST00000463916 TMEM131Q92545 1883 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 A0A1W2PR77 199 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 KRIT1O00522 736 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 DAPK3O43293 454 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 HCAR3P49019 387 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 NDST2P52849 883 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 MYLK3Q32MK0 819 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 BOLA3Q53S33 107 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 INO80DQ53TQ3 878 aaPredicted RBP13.18□□□□□ -0.3
XRN1-203ENST00000463916 SARM1Q6SZW1 724 aa13.18□□□□□ -0.3
XRN1-203ENST00000463916 ARHGAP36Q6ZRI8 547 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms