RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TBC1D13Q9NVG8 400 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 DKK2Q9UBU2 259 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ZNHIT2Q9UHR6 403 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 GMEB2Q9UKD1 530 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 DNM3Q9UQ16 869 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 CLUHO75153 1309 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 CNOT1A5YKK6 2376 aaKnown RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 CCDC78A2IDD5 438 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 INPPL1O15357 1258 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 SLC16A4O15374 487 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 B4GALT5O43286 388 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 PHF2O75151 1096 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 RFPL2O75678 378 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 RHOBTB3O94955 611 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 PRSS23O95084 383 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ALDH2P05091 517 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ELANEP08246 267 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 IDEP14735 1019 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ALOX15P16050 662 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 DDX6P26196 483 aaKnown RBP eCLIP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 MGAT1P26572 445 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ECHS1P30084 290 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ARL2P36404 184 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 GPR3P46089 330 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ZNF131P52739 623 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 STX17P56962 302 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 NLRP11P59045 1033 aaKnown RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 MLF2Q15773 248 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 NOMO2Q5JPE7 1267 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 FAM160B1Q5W0V3 765 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 SLC39A4Q6P5W5 647 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 TSSK4Q6SA08 328 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 PARM1Q6UWI2 310 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 OLFML1Q6UWY5 402 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 UNC13DQ70J99 1090 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 EPM2AIP1Q7L775 607 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 MRPL10Q7Z7H8 261 aaKnown RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 CDR2LQ86X02 465 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ZNF280BQ86YH2 543 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 CEP57L1Q8IYX8 460 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ASB10Q8WXI3 467 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 SMG7Q92540 1137 aaKnown RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 FGF14Q92915 247 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 FATE1Q969F0 183 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 EEF2KMTQ96G04 330 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 AHCYL2Q96HN2 611 aaKnown RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 TMEM175Q9BSA9 504 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 MRI1Q9BV20 369 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 STRA6Q9BX79 667 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ZHX3Q9H4I2 956 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 MAN1C1Q9NR34 630 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 PANK4Q9NVE7 773 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 DNAJC28Q9NX36 388 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 ZDHHC7Q9NXF8 308 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 TCEAL9Q9UHQ7 104 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 SCOCQ9UIL1 159 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 CDH7Q9ULB5 785 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 SSX2IPQ9Y2D8 614 aa3.89□□□□□ -1.79
SCFD1-204ENST00000463622 TMA7Q9Y2S6 64 aaKnown RBP3.89□□□□□ -1.79
SCFD1-204ENST00000463622 FLNBO75369 2602 aaKnown RBP3.88□□□□□ -1.79
SCFD1-204ENST00000463622 PLXNA4Q9HCM2 1894 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 ANKRD63C9JTQ0 380 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 NCAM2O15394 837 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 TGFB1I1O43294 461 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 BRINP1O60477 761 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 ZC3H11AO75152 810 aaKnown RBP eCLIP3.88□□□□□ -1.79
SCFD1-204ENST00000463622 PPFIA2O75334 1257 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 DDHD2O94830 711 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 SPDEFO95238 335 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 MUTP22033 750 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 SLC6A2P23975 617 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 ADRA1BP35368 520 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 PRCPP42785 496 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 NPTX2P47972 431 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 GPC3P51654 580 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 PEX3P56589 373 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 CDC42EP1Q00587 391 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 MTAPQ13126 283 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 ANO6Q4KMQ2 910 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 ZCWPW2Q504Y3 356 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 HSP90AA4PQ58FG1 418 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 NELFCDQ8IXH7 590 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 METTL13Q8N6R0 699 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 TMEM161BQ8NDZ6 487 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 OR56A1Q8NGH5 318 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 SCFD1Q8WVM8 642 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 PRPF31Q8WWY3 499 aaKnown RBP3.88□□□□□ -1.79
SCFD1-204ENST00000463622 SMARCE1Q969G3 411 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 CXCL16Q9H2A7 254 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 SYNPO2LQ9H987 977 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 BCO1Q9HAY6 547 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 RBM12Q9NTZ6 932 aaKnown RBP3.88□□□□□ -1.79
SCFD1-204ENST00000463622 DNAJB4Q9UDY4 337 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 AJAP1Q9UKB5 411 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-204ENST00000463622 RUVBL1Q9Y265 456 aaKnown RBP3.88□□□□□ -1.79
SCFD1-204ENST00000463622 EPN1Q9Y6I3 576 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-204ENST00000463622 ASPMQ8IZT6 3477 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 CEP295Q9C0D2 2601 aa3.88□□□□□ -1.79
SCFD1-204ENST00000463622 A0A087WZ62 844 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms