RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 LBRQ14739 615 aaKnown RBP20.13■□□□□ 0.81
COL9A3-204ENST00000463487 GRM3Q14832 879 aa20.13■□□□□ 0.81
COL9A3-204ENST00000463487 PDK1Q15118 436 aa20.13■□□□□ 0.81
COL9A3-204ENST00000463487 USP30Q70CQ3 517 aa20.13■□□□□ 0.81
COL9A3-204ENST00000463487 PLD5Q8N7P1 536 aa20.13■□□□□ 0.81
COL9A3-204ENST00000463487 CCNYQ8ND76 341 aa20.13■□□□□ 0.81
COL9A3-204ENST00000463487 P3H4Q92791 437 aa20.13■□□□□ 0.81
COL9A3-204ENST00000463487 FAM129BQ96TA1 746 aa20.13■□□□□ 0.81
COL9A3-204ENST00000463487 OMDQ99983 421 aa20.13■□□□□ 0.81
COL9A3-204ENST00000463487 HEPHQ9BQS7 1158 aa20.13■□□□□ 0.81
COL9A3-204ENST00000463487 SLC6A17Q9H1V8 727 aa20.13■□□□□ 0.81
COL9A3-204ENST00000463487 PABPC3Q9H361 631 aaKnown RBP20.13■□□□□ 0.81
COL9A3-204ENST00000463487 USP36Q9P275 1121 aaKnown RBP20.13■□□□□ 0.81
COL9A3-204ENST00000463487 HECAQ9UBI9 543 aaPredicted RBP20.13■□□□□ 0.81
COL9A3-204ENST00000463487 NDUFS2O75306 463 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 RHOBTB1O94844 696 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 POP4O95707 220 aaKnown RBP20.12■□□□□ 0.81
COL9A3-204ENST00000463487 CD160O95971 181 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 CCNCP24863 283 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 SLC8A1P32418 973 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 PTPN7P35236 360 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 MAPK8P45983 427 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 PEX5P50542 639 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 CCNHP51946 323 aaPredicted RBP20.12■□□□□ 0.81
COL9A3-204ENST00000463487 GBE1Q04446 702 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 ZNF33AQ06730 810 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 DPY19L3Q6ZPD9 716 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 PRR23BQ6ZRT6 265 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 TMIEQ8NEW7 156 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 PIP4K2CQ8TBX8 421 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 FATE1Q969F0 183 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 HDAC11Q96DB2 347 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 HES6Q96HZ4 224 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 TSGA13Q96PP4 275 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 EPC1Q9H2F5 836 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 DTLQ9NZJ0 730 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 CYP8B1Q9UNU6 501 aa20.12■□□□□ 0.81
COL9A3-204ENST00000463487 NYNRINQ9P2P1 1898 aaKnown RBP20.11■□□□□ 0.81
COL9A3-204ENST00000463487 CACNA1HO95180 2353 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 MID1O15344 667 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 HRO43593 1189 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 TJP3O95049 919 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 KRT10P13645 584 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 CD6P30203 668 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 TPMTP51580 245 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 RPS6KA1Q15418 735 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 MAP7D1Q3KQU3 841 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 SEL1L2Q5TEA6 688 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 MARC1Q5VT66 337 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 ARHGAP36Q6ZRI8 547 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 NETO2Q8NC67 525 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 GRIN3AQ8TCU5 1115 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 ALG3Q92685 438 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 FERMT1Q9BQL6 677 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 OSBPL1AQ9BXW6 950 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 OSBPL8Q9BZF1 889 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 ZDHHC6Q9H6R6 413 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 FAM86C1Q9NVL1 165 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 FBXL12Q9NXK8 326 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 PPM1HQ9ULR3 514 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 FZD4Q9ULV1 537 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 PACSIN2Q9UNF0 486 aaPredicted RBP20.11■□□□□ 0.81
COL9A3-204ENST00000463487 ACTL7AQ9Y615 435 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 MUC6Q6W4X9 2439 aa20.11■□□□□ 0.81
COL9A3-204ENST00000463487 FANCMQ8IYD8 2048 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 KPNA3O00505 521 aaPredicted RBP20.1■□□□□ 0.81
COL9A3-204ENST00000463487 KRIT1O00522 736 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 KIF5CO60282 957 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 IGLV3-19P01714 112 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 NHLH1Q02575 133 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 HNRNPDQ14103 355 aaKnown RBP20.1■□□□□ 0.81
COL9A3-204ENST00000463487 CYTH1Q15438 398 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 MYLK3Q32MK0 819 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 SPDYCQ5MJ68 293 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 BBS12Q6ZW61 710 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 LPCAT2Q7L5N7 544 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 TP53INP2Q8IXH6 220 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 RLN3Q8WXF3 142 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 PSKH2Q96QS6 385 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 BTBD1Q9H0C5 482 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 SGK2Q9HBY8 427 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 AMACRQ9UHK6 382 aa20.1■□□□□ 0.81
COL9A3-204ENST00000463487 IGHV1OR15-9A0A0B4J2B8 117 aa20.09■□□□□ 0.81
COL9A3-204ENST00000463487 APOC4-APOC2K7ER74 178 aa20.09■□□□□ 0.81
COL9A3-204ENST00000463487 MATN3O15232 486 aa20.09■□□□□ 0.81
COL9A3-204ENST00000463487 DDX3YO15523 660 aaKnown RBP20.09■□□□□ 0.81
COL9A3-204ENST00000463487 SLC7A4O43246 635 aa20.09■□□□□ 0.81
COL9A3-204ENST00000463487 ZNF821O75541 412 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-204ENST00000463487 RNASEH2AO75792 299 aaKnown RBP20.09■□□□□ 0.81
COL9A3-204ENST00000463487 ZNF189O75820 626 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-204ENST00000463487 MAP3K6O95382 1288 aa20.09■□□□□ 0.81
COL9A3-204ENST00000463487 APOC2P02655 101 aa20.09■□□□□ 0.81
COL9A3-204ENST00000463487 MMP13P45452 471 aa20.09■□□□□ 0.81
COL9A3-204ENST00000463487 CSNK1DP48730 415 aa20.09■□□□□ 0.81
COL9A3-204ENST00000463487 RPL6Q02878 288 aaKnown RBP20.09■□□□□ 0.81
COL9A3-204ENST00000463487 NSUN2Q08J23 767 aaKnown RBP eCLIP20.09■□□□□ 0.81
COL9A3-204ENST00000463487 SRSF5Q13243 272 aaKnown RBP20.09■□□□□ 0.81
COL9A3-204ENST00000463487 ARSIQ5FYB1 569 aa20.09■□□□□ 0.81
COL9A3-204ENST00000463487 ATXN7L2Q5T6C5 722 aaPredicted RBP20.09■□□□□ 0.81
COL9A3-204ENST00000463487 MEI1Q5TIA1 1274 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms