RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 CCR5P51681 352 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 GSDMDP57764 484 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 LMNB2Q03252 620 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 NSUN2Q08J23 767 aaKnown RBP eCLIP12.29□□□□□ -0.44
HPS1-206ENST00000462743 KRT81Q14533 505 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 PAFAH1B3Q15102 231 aaKnown RBP12.29□□□□□ -0.44
HPS1-206ENST00000462743 DUOXA1Q1HG43 343 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 MYLK3Q32MK0 819 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 NEK5Q6P3R8 708 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 TMCO3Q6UWJ1 677 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 PRR23CQ6ZRP0 262 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 NPWQ8N729 165 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 KCTD6Q8NC69 237 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 OR2T34Q8NGX1 318 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 PCDH19Q8TAB3 1148 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 PIGKQ92643 395 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 CELF6Q96J87 481 aaKnown RBP12.29□□□□□ -0.44
HPS1-206ENST00000462743 HSPA12BQ96MM6 686 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 ZNF599Q96NL3 588 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 HINFPQ9BQA5 517 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 HDAC8Q9BY41 377 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 CPEB1Q9BZB8 566 aaKnown RBP12.29□□□□□ -0.44
HPS1-206ENST00000462743 TNKS2Q9H2K2 1166 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 TMEM74BQ9NUR3 256 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 HECAQ9UBI9 543 aaPredicted RBP12.29□□□□□ -0.44
HPS1-206ENST00000462743 UBA2Q9UBT2 640 aaPredicted RBP12.29□□□□□ -0.44
HPS1-206ENST00000462743 SERGEFQ9UGK8 458 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 IL36AQ9UHA7 158 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 IPO11Q9UI26 975 aaKnown RBP12.29□□□□□ -0.44
HPS1-206ENST00000462743 FCF1Q9Y324 198 aaKnown RBP12.29□□□□□ -0.44
HPS1-206ENST00000462743 ACTL7AQ9Y615 435 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 ALG6Q9Y672 507 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 VPS13AQ96RL7 3174 aa12.29□□□□□ -0.44
HPS1-206ENST00000462743 RCCD1A6NED2 376 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 J3KR12 359 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 KHNYNO15037 678 aaKnown RBP12.28□□□□□ -0.44
HPS1-206ENST00000462743 BUB1BO60566 1050 aaPredicted RBP12.28□□□□□ -0.44
HPS1-206ENST00000462743 LEFTY1O75610 366 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 RNASEH2AO75792 299 aaKnown RBP12.28□□□□□ -0.44
HPS1-206ENST00000462743 SERPINF2P08697 491 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 CD48P09326 243 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 NOP2P46087 812 aaKnown RBP12.28□□□□□ -0.44
HPS1-206ENST00000462743 CCNHP51946 323 aaPredicted RBP12.28□□□□□ -0.44
HPS1-206ENST00000462743 VAV2P52735 878 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 RAD51Q06609 339 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 CNTN1Q12860 1018 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 GRM3Q14832 879 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 ANKRD20A8PQ5CZ79 823 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 ARSIQ5FYB1 569 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 DCAF12L1Q5VU92 463 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 KIAA0895LQ68EN5 471 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.28□□□□□ -0.44
HPS1-206ENST00000462743 FAM124AQ86V42 546 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 CACUL1Q86Y37 369 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 RHOT1Q8IXI2 618 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 KIAA2013Q8IYS2 634 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 DEFB119Q8N690 84 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 PQLC3Q8N755 202 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 SPC24Q8NBT2 197 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 TPCN2Q8NHX9 752 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 HCAR2Q8TDS4 363 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 RAPGEF5Q92565 580 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 FATE1Q969F0 183 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 ARRDC3Q96B67 414 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 TSGA13Q96PP4 275 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 RNF157Q96PX1 679 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 ORAI3Q9BRQ5 295 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 C6orf106Q9H6K1 298 aaPredicted RBP12.28□□□□□ -0.44
HPS1-206ENST00000462743 DDX56Q9NY93 547 aaKnown RBP12.28□□□□□ -0.44
HPS1-206ENST00000462743 LHX3Q9UBR4 397 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 SUSD2Q9UGT4 822 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 SALL4Q9UJQ4 1053 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 SLC6A14Q9UN76 642 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.28□□□□□ -0.44
HPS1-206ENST00000462743 WDR87Q6ZQQ6 2873 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 SHROOM3Q8TF72 1996 aa12.28□□□□□ -0.44
HPS1-206ENST00000462743 C3orf70A6NLC5 250 aaPredicted RBP12.27□□□□□ -0.45
HPS1-206ENST00000462743 TMEM110-MUSTN1A8MSY1 372 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 LATO43561 262 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 PLRG1O43660 514 aaKnown RBP12.27□□□□□ -0.45
HPS1-206ENST00000462743 BNIP3LO60238 219 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 MAFKO60675 156 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 PEX11BO96011 259 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 IGHV4-34P06331 123 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 SDHBP21912 280 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 COMTP21964 271 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 CD27P26842 260 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 NUDT1P36639 197 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 DNA2P51530 1060 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 RENBPP51606 427 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 METAP1P53582 386 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 LIMK1P53667 647 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 ADPRHP54922 357 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 IRX4P78413 519 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 TAZQ16635 292 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 PIP5KL1Q5T9C9 394 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 AGBL4Q5VU57 503 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 C11orf63Q6NUN7 778 aa12.27□□□□□ -0.45
HPS1-206ENST00000462743 ERN2Q76MJ5 926 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms