RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TSPAN6O43657 245 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 CBFA2T3O75081 653 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 RFPL3O75679 317 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 KRT37O76014 449 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 LRIG2O94898 1065 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 POP4O95707 220 aaKnown RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 C1SP09871 688 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 ATXN1LP0C7T5 689 aaKnown RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 CHRNB2P17787 502 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 PSMA2P25787 234 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 ITGB7P26010 798 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 L1CAMP32004 1257 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 ZNF165P49910 485 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 CCNHP51946 323 aaPredicted RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 TPI1P60174 286 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 RHOAP61586 193 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 BNC1Q01954 994 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 NRG1Q02297 640 aaPredicted RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 KLHL30Q0D2K2 578 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 OTUD1Q5VV17 481 aaPredicted RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 DPY19L2P1Q6NXN4 242 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 WDR59Q6PJI9 974 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 PTAR1Q7Z6K3 402 aaPredicted RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 TTC7BQ86TV6 843 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 KDF1Q8NAX2 398 aaPredicted RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 CHST14Q8NCH0 376 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 OR52K2Q8NGK3 314 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 JOSD2Q8TAC2 188 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 CXorf40AQ8TE69 158 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 NTAN1Q96AB6 310 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 ISG20Q96AZ6 181 aaKnown RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 VCPIP1Q96JH7 1222 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 GDAP1L1Q96MZ0 367 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 PSMB7Q99436 277 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 BPIFA3Q9BQP9 254 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 CNPY3Q9BT09 278 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 ANP32EQ9BTT0 268 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.03□□□□□ -0.96
LDB1-203ENST00000461873 TMEM248Q9NWD8 314 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 SCINQ9Y6U3 715 aa9.03□□□□□ -0.96
LDB1-203ENST00000461873 TP53BP1Q12888 1972 aaPredicted RBP9.03□□□□□ -0.96
LDB1-203ENST00000461873 ACACBO00763 2458 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 ARHGAP42A6NI28 874 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 EIF3CLB5ME19 914 aaKnown RBP9.02□□□□□ -0.97
LDB1-203ENST00000461873 EEF2KO00418 725 aaKnown RBP9.02□□□□□ -0.97
LDB1-203ENST00000461873 EPHB6O15197 1021 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 CCP110O43303 1012 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 KDELR3O43731 214 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 PRPSAP2O60256 369 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 GJB6O95452 261 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 GSRP00390 522 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 ADRB3P13945 408 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 PRLRP16471 622 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 GLDCP23378 1020 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 NFKBIAP25963 317 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 EPHA8P29322 1005 aaPredicted RBP9.02□□□□□ -0.97
LDB1-203ENST00000461873 HTR7P34969 479 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 ACVRL1P37023 503 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 DUSP3P51452 185 aaPredicted RBP9.02□□□□□ -0.97
LDB1-203ENST00000461873 THOP1P52888 689 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 GSCP56915 257 aaPredicted RBP9.02□□□□□ -0.97
LDB1-203ENST00000461873 YBEYP58557 167 aaPredicted RBP9.02□□□□□ -0.97
LDB1-203ENST00000461873 SCAPQ12770 1279 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 PTK2BQ14289 1009 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 GRM3Q14832 879 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 PARP15Q460N3 678 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 TDRD12Q587J7 1177 aaKnown RBP9.02□□□□□ -0.97
LDB1-203ENST00000461873 ZNF805Q5CZA5 627 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 PIP5KL1Q5T9C9 394 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 ERAP2Q6P179 960 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 DBX2Q6ZNG2 339 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 TMPRSS7Q7RTY8 843 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 TMC6Q7Z403 805 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 SLCO6A1Q86UG4 719 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 TMPRSS12Q86WS5 348 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 PLPP6Q8IY26 295 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 ZNF683Q8IZ20 524 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 BBS5Q8N3I7 341 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 CCDC185Q8N715 623 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 RTL3Q8N8U3 475 aaKnown RBP9.02□□□□□ -0.97
LDB1-203ENST00000461873 OR2AP1Q8NGE2 309 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 NSMCE1Q8WV22 266 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 ARHGEF2Q92974 986 aaKnown RBP9.02□□□□□ -0.97
LDB1-203ENST00000461873 GLMNQ92990 594 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 PCDHB18PQ96TA0 734 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 EIF3CQ99613 913 aaKnown RBP9.02□□□□□ -0.97
LDB1-203ENST00000461873 SLC17A9Q9BYT1 436 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 ABCG4Q9H172 646 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 EBF2Q9HAK2 575 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 ANLNQ9NQW6 1124 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 DNAJC28Q9NX36 388 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 DOLKQ9UPQ8 538 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 BTBD3Q9Y2F9 522 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 PCDHGA1Q9Y5H4 931 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 SLCO1B1Q9Y6L6 691 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 CABIN1Q9Y6J0 2220 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 CACNA1BQ00975 2339 aa9.02□□□□□ -0.97
LDB1-203ENST00000461873 A0A1W2PR77 199 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 FAM221BA6H8Z2 402 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 LRRC53A6NM62 1247 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms