RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 DMXL2Q8TDJ6 3036 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 MYLKQ15746 1914 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 A0A1W2PQU0 124 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 FAM221BA6H8Z2 402 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 SIGLEC16A6NMB1 481 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 ATXN1LP0C7T5 689 aaKnown RBP14.22□□□□□ -0.13
USP4-206ENST00000461553 ITGB7P26010 798 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 ACVRL1P37023 503 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 CCNHP51946 323 aaPredicted RBP14.22□□□□□ -0.13
USP4-206ENST00000461553 ZNF143P52747 638 aaPredicted RBP14.22□□□□□ -0.13
USP4-206ENST00000461553 AIF1P55008 147 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 TAS2R38P59533 333 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 CARD16Q5EG05 197 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 ARSIQ5FYB1 569 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 SCYL2Q6P3W7 929 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 DCUN1D2Q6PH85 259 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 WDR59Q6PJI9 974 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 SLFN11Q7Z7L1 901 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 HORMAD1Q86X24 394 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 RYBPQ8N488 228 aaPredicted RBP14.22□□□□□ -0.13
USP4-206ENST00000461553 ARHGEF2Q92974 986 aaKnown RBP14.22□□□□□ -0.13
USP4-206ENST00000461553 EPAS1Q99814 870 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 MYOCQ99972 504 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 HEPHQ9BQS7 1158 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 MAGEH1Q9H213 219 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 ERVMER34-1Q9H9K5 563 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 NDFIP2Q9NV92 336 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 TOR4AQ9NXH8 423 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 WASF2Q9Y6W5 498 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 APC2O95996 2303 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 LRRK1Q38SD2 2015 aa14.22□□□□□ -0.13
USP4-206ENST00000461553 FAM72CH0Y354 149 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 PCDH8O95206 1070 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 ADRB3P13945 408 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 PRLRP16471 622 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 TNFAIP3P21580 790 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 HNRNPA2B1P22626 353 aaKnown RBP14.21□□□□□ -0.13
USP4-206ENST00000461553 EPHB2P29323 1055 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 AKT2P31751 481 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 POLD3Q15054 466 aaPredicted RBP14.21□□□□□ -0.13
USP4-206ENST00000461553 ASIC2Q16515 512 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 CCDC157Q569K6 752 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 PRAMEF14Q5SWL7 426 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 FAM72AQ5TYM5 149 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 ACAD10Q6JQN1 1059 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 FAM72DQ6L9T8 149 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 FAM72BQ86X60 149 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 GALNT15Q8N3T1 639 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 RTL3Q8N8U3 475 aaKnown RBP14.21□□□□□ -0.13
USP4-206ENST00000461553 SAP25Q8TEE9 199 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 ISG20Q96AZ6 181 aaKnown RBP14.21□□□□□ -0.13
USP4-206ENST00000461553 CNPY3Q9BT09 278 aa14.21□□□□□ -0.13
USP4-206ENST00000461553 RTN4Q9NQC3 1192 aaKnown RBP14.21□□□□□ -0.13
USP4-206ENST00000461553 TCRBV5S1A1TA0A578 114 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 ZSCAN5CA6NGD5 496 aaPredicted RBP14.2□□□□□ -0.14
USP4-206ENST00000461553 LRRC53A6NM62 1247 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 SLC31A1O15431 190 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 TEX33O43247 280 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 CREB3O43889 395 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 ZNF821O75541 412 aaPredicted RBP14.2□□□□□ -0.14
USP4-206ENST00000461553 DKK1O94907 266 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 GSRP00390 522 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 THEGLP0DJG4 465 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 L1CAMP32004 1257 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 ZNF165P49910 485 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 SNRPD1P62314 119 aaKnown RBP14.2□□□□□ -0.14
USP4-206ENST00000461553 RPL7AP62424 266 aaKnown RBP14.2□□□□□ -0.14
USP4-206ENST00000461553 SHBQ15464 509 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 KIAA1161Q6NSJ0 714 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 FBXL19Q6PCT2 694 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 PARS2Q7L3T8 475 aaKnown RBP14.2□□□□□ -0.14
USP4-206ENST00000461553 SPATS2Q86XZ4 545 aaKnown RBP14.2□□□□□ -0.14
USP4-206ENST00000461553 MCOLN2Q8IZK6 566 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 TMEM145Q8NBT3 493 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 OR2AP1Q8NGE2 309 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 OR6K2Q8NGY2 324 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 BAP1Q92560 729 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 KLK6Q92876 244 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 KLHDC7BQ96G42 594 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 CNDP2Q96KP4 475 aaKnown RBP14.2□□□□□ -0.14
USP4-206ENST00000461553 CATSPERBQ9H7T0 1116 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 FZD3Q9NPG1 666 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 HECAQ9UBI9 543 aaPredicted RBP14.2□□□□□ -0.14
USP4-206ENST00000461553 CA5BQ9Y2D0 317 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 ACTL7AQ9Y615 435 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 SHROOM3Q8TF72 1996 aa14.2□□□□□ -0.14
USP4-206ENST00000461553 TMCO5BA8MYB1 307 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 ENC1O14682 589 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 FGF10O15520 208 aaPredicted RBP14.19□□□□□ -0.14
USP4-206ENST00000461553 LDOC1O95751 146 aaPredicted RBP14.19□□□□□ -0.14
USP4-206ENST00000461553 RXRGP48443 463 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 TPI1P60174 286 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 RPS21P63220 83 aaKnown RBP14.19□□□□□ -0.14
USP4-206ENST00000461553 ZNF284Q2VY69 593 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 PPP1R15BQ5SWA1 713 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 SEL1L3Q68CR1 1132 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 CCNI2Q6ZMN8 369 aaPredicted RBP14.19□□□□□ -0.14
USP4-206ENST00000461553 TMPRSS7Q7RTY8 843 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 TMC6Q7Z403 805 aa14.19□□□□□ -0.14
USP4-206ENST00000461553 ZSCAN30Q86W11 494 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms