RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PRNPP04156 253 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 ZNF883P0CG24 379 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 CHRNA3P32297 505 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 SSR1P43307 286 aaKnown RBP15.68■□□□□ 0.1
VARS-219ENST00000461328 ADKP55263 362 aaKnown RBP15.68■□□□□ 0.1
VARS-219ENST00000461328 PPP2CBP62714 309 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 PPP2CAP67775 309 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 CNTN1Q12860 1018 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 PIGHQ14442 188 aaPredicted RBP15.68■□□□□ 0.1
VARS-219ENST00000461328 CA9Q16790 459 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 SMTNL2Q2TAL5 461 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 LEKR1Q6ZMV7 388 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 CNGA4Q8IV77 575 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 ARFGAP1Q8N6T3 406 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 PCDH20Q8N6Y1 951 aaKnown RBP15.68■□□□□ 0.1
VARS-219ENST00000461328 SETD7Q8WTS6 366 aaKnown RBP15.68■□□□□ 0.1
VARS-219ENST00000461328 CTNNBL1Q8WYA6 563 aaPredicted RBP15.68■□□□□ 0.1
VARS-219ENST00000461328 HSPH1Q92598 858 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 FAM131CQ96AQ9 280 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 SKA1Q96BD8 255 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 ARHGEF26Q96DR7 871 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 KCTD15Q96SI1 283 aaPredicted RBP15.68■□□□□ 0.1
VARS-219ENST00000461328 EIF3CQ99613 913 aaKnown RBP15.68■□□□□ 0.1
VARS-219ENST00000461328 TM6SF2Q9BZW4 377 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 KDM4CQ9H3R0 1056 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 ZWILCHQ9H900 591 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 CTTNBP2NLQ9P2B4 639 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 IL36AQ9UHA7 158 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 IP6K2Q9UHH9 426 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 ACTL7AQ9Y615 435 aa15.68■□□□□ 0.1
VARS-219ENST00000461328 ZSCAN5CA6NGD5 496 aaPredicted RBP15.67■□□□□ 0.1
VARS-219ENST00000461328 RASA4BC9J798 803 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 VILLO15195 856 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 RASA4O43374 803 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 BUB1O43683 1085 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 CYP1A2P05177 515 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 CTSLP07711 333 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 PCK1P35558 622 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 FAM193AP78312 1265 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 CCDC15Q0P6D6 951 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 ACAP1Q15027 740 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 TRIP6Q15654 476 aaKnown RBP15.67■□□□□ 0.1
VARS-219ENST00000461328 SLC18A3Q16572 532 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 PARP15Q460N3 678 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 AGBL4Q5VU57 503 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 SARM1Q6SZW1 724 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 DPY19L3Q6ZPD9 716 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 RFX8Q6ZV50 586 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 PRPF39Q86UA1 669 aaKnown RBP15.67■□□□□ 0.1
VARS-219ENST00000461328 CHST14Q8NCH0 376 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 ZNF564Q8TBZ8 553 aaPredicted RBP15.67■□□□□ 0.1
VARS-219ENST00000461328 HMCESQ96FZ2 354 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 PPP1R16AQ96I34 528 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 SERAC1Q96JX3 654 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 BTBD6Q96KE9 485 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 ZDHHC6Q9H6R6 413 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 EBF2Q9HAK2 575 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 PCDHGB2Q9Y5G2 931 aa15.67■□□□□ 0.1
VARS-219ENST00000461328 SSU72P8A0A1W2PR75 194 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 WASH4PA8MWX3 477 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 AKR1B15C9JRZ8 316 aaPredicted RBP15.66■□□□□ 0.1
VARS-219ENST00000461328 H3BRJ5 948 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 MYO1FO00160 1098 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 KCNK3O14649 394 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 KDELR3O43731 214 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 MAT2AP31153 395 aaKnown RBP15.66■□□□□ 0.1
VARS-219ENST00000461328 GJC1P36383 396 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 CTSKP43235 329 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 CCT8P50990 548 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 CCNHP51946 323 aaPredicted RBP15.66■□□□□ 0.1
VARS-219ENST00000461328 YBEYP58557 167 aaPredicted RBP15.66■□□□□ 0.1
VARS-219ENST00000461328 MAPK8IP2Q13387 824 aaPredicted RBP15.66■□□□□ 0.1
VARS-219ENST00000461328 SUZ12Q15022 739 aaKnown RBP15.66■□□□□ 0.1
VARS-219ENST00000461328 SLC45A4Q5BKX6 768 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 CARD16Q5EG05 197 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 ARSIQ5FYB1 569 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 KCNT1Q5JUK3 1230 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 PSTKQ8IV42 348 aaKnown RBP15.66■□□□□ 0.1
VARS-219ENST00000461328 TMIEQ8NEW7 156 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 CELF6Q96J87 481 aaKnown RBP15.66■□□□□ 0.1
VARS-219ENST00000461328 CCDC42Q96M95 316 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 PREBQ9HCU5 417 aa15.66■□□□□ 0.1
VARS-219ENST00000461328 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.66■□□□□ 0.1
VARS-219ENST00000461328 PLXNA2O75051 1894 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 ARHGAP42A6NI28 874 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 C10orf142B7Z368 130 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 H0Y8X5 98 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 FLRT2O43155 660 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 LATO43561 262 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 LEFTY1O75610 366 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 TMCC1O94876 653 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 TOP3BO95985 862 aaKnown RBP15.65■□□□□ 0.1
VARS-219ENST00000461328 H2AFZP0C0S5 128 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 SPINK2P20155 84 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 CD38P28907 300 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 NUDT1P36639 197 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 ARL4AP40617 200 aa15.65■□□□□ 0.1
VARS-219ENST00000461328 ZNF135P52742 658 aaPredicted RBP15.65■□□□□ 0.1
VARS-219ENST00000461328 SNRPD1P62314 119 aaKnown RBP15.65■□□□□ 0.1
VARS-219ENST00000461328 PIP5KL1Q5T9C9 394 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms