RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 NETO2Q8NC67 525 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 MDGA1Q8NFP4 955 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 OR8D1Q8WZ84 308 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 FATE1Q969F0 183 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 MRGPRX1Q96LB2 322 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 TSGA13Q96PP4 275 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 OSBPL8Q9BZF1 889 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 BRD8Q9H0E9 1235 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 RSPH9Q9H1X1 276 aaPredicted RBP22.86■■□□□ 1.25
C9orf3-209ENST00000460573 MTG2Q9H4K7 406 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 FCF1Q9Y324 198 aaKnown RBP22.86■■□□□ 1.25
C9orf3-209ENST00000460573 MCF2LO15068 1137 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 TMCC1O94876 653 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 GSRP00390 522 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 NDUFV2P19404 249 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 CCNCP24863 283 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 SNRPD1P62314 119 aaKnown RBP22.85■■□□□ 1.25
C9orf3-209ENST00000460573 ZNF33AQ06730 810 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 SLC10A2Q12908 348 aaPredicted RBP22.85■■□□□ 1.25
C9orf3-209ENST00000460573 BYSLQ13895 437 aaKnown RBP22.85■■□□□ 1.25
C9orf3-209ENST00000460573 PDK1Q15118 436 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 CARD16Q5EG05 197 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 ZNF776Q68DI1 518 aaPredicted RBP22.85■■□□□ 1.25
C9orf3-209ENST00000460573 ARHGAP36Q6ZRI8 547 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 Q6ZVU0 165 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 BBS5Q8N3I7 341 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 PRCCQ92733 491 aaPredicted RBP22.85■■□□□ 1.25
C9orf3-209ENST00000460573 HDAC11Q96DB2 347 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 SIPA1Q96FS4 1042 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 FAM129BQ96TA1 746 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 MKRN2Q9H000 416 aaKnown RBP22.85■■□□□ 1.25
C9orf3-209ENST00000460573 KCND1Q9NSA2 647 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 SCML1Q9UN30 329 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 JRKLQ9Y4A0 524 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 HEY1Q9Y5J3 304 aa22.85■■□□□ 1.25
C9orf3-209ENST00000460573 ZNF821O75541 412 aaPredicted RBP22.84■■□□□ 1.25
C9orf3-209ENST00000460573 TJP3O95049 919 aa22.84■■□□□ 1.25
C9orf3-209ENST00000460573 VAV1P15498 845 aa22.84■■□□□ 1.25
C9orf3-209ENST00000460573 RENBPP51606 427 aa22.84■■□□□ 1.25
C9orf3-209ENST00000460573 DYNLT1P63172 113 aa22.84■■□□□ 1.25
C9orf3-209ENST00000460573 SFSWAPQ12872 951 aaKnown RBP22.84■■□□□ 1.25
C9orf3-209ENST00000460573 LEKR1Q6ZMV7 388 aa22.84■■□□□ 1.25
C9orf3-209ENST00000460573 OR2AP1Q8NGE2 309 aa22.84■■□□□ 1.25
C9orf3-209ENST00000460573 OR2A12Q8NGT7 310 aa22.84■■□□□ 1.25
C9orf3-209ENST00000460573 P3H4Q92791 437 aa22.84■■□□□ 1.25
C9orf3-209ENST00000460573 ACTL7AQ9Y615 435 aa22.84■■□□□ 1.25
C9orf3-209ENST00000460573 APOC4-APOC2K7ER74 178 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 PPP1R12AO14974 1030 aaPredicted RBP22.83■■□□□ 1.25
C9orf3-209ENST00000460573 ZNF217O75362 1048 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 APOC2P02655 101 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 RHOAP61586 193 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 HNRNPDQ14103 355 aaKnown RBP22.83■■□□□ 1.25
C9orf3-209ENST00000460573 LBRQ14739 615 aaKnown RBP22.83■■□□□ 1.25
C9orf3-209ENST00000460573 CYTH1Q15438 398 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 USP39Q53GS9 565 aaKnown RBP22.83■■□□□ 1.25
C9orf3-209ENST00000460573 SEL1L2Q5TEA6 688 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 STK40Q8N2I9 435 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 GAB3Q8WWW8 586 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 OLFM3Q96PB7 478 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 CINPQ9BW66 212 aaPredicted RBP22.83■■□□□ 1.25
C9orf3-209ENST00000460573 HEMGNQ9BXL5 484 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 CARD9Q9H257 536 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 SEPT3Q9UH03 358 aa22.83■■□□□ 1.25
C9orf3-209ENST00000460573 NYNRINQ9P2P1 1898 aaKnown RBP22.83■■□□□ 1.24
C9orf3-209ENST00000460573 SPAG17Q6Q759 2223 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 GPR179Q6PRD1 2367 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 MATN3O15232 486 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 BNIP3LO60238 219 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 LRP3O75074 770 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 IGSF6O95976 241 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 ADH1BP00325 375 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 DNTTP04053 509 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 ACADMP11310 421 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 HSPA9P38646 679 aaKnown RBP22.82■■□□□ 1.24
C9orf3-209ENST00000460573 DNA2P51530 1060 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 RAD51Q06609 339 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 ADCY2Q08462 1091 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 PPIDQ08752 370 aaKnown RBP22.82■■□□□ 1.24
C9orf3-209ENST00000460573 NSUN2Q08J23 767 aaKnown RBP eCLIP22.82■■□□□ 1.24
C9orf3-209ENST00000460573 LLGL1Q15334 1064 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 ZNF569Q5MCW4 686 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 CCDC181Q5TID7 509 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 MARC1Q5VT66 337 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 FAM46CQ5VWP2 391 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 FAM160A2Q8N612 972 aaPredicted RBP22.82■■□□□ 1.24
C9orf3-209ENST00000460573 CCNYQ8ND76 341 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 TMIEQ8NEW7 156 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 ERLEC1Q96DZ1 483 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 LRIG1Q96JA1 1093 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 GDAP1L1Q96MZ0 367 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 HEPHQ9BQS7 1158 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 TLR10Q9BXR5 811 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 TNKS2Q9H2K2 1166 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 HAUS2Q9NVX0 235 aa22.82■■□□□ 1.24
C9orf3-209ENST00000460573 USP27XA6NNY8 438 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 C1QTNF3-AMACRE9PGA6 284 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 POP4O95707 220 aaKnown RBP22.81■■□□□ 1.24
C9orf3-209ENST00000460573 PEX11BO96011 259 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 PRNPP04156 253 aa22.81■■□□□ 1.24
C9orf3-209ENST00000460573 CHRNA3P32297 505 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms