RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 NKX3-2P78367 333 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 ITGA9Q13797 1035 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 NXNQ6DKJ4 435 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 SLC41A1Q8IVJ1 513 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 HS6ST3Q8IZP7 471 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 LPCAT1Q8NF37 534 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 BADQ92934 168 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 CENPTQ96BT3 561 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 PGAP3Q96FM1 320 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 RPL10LQ96L21 214 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 GCNAQ96QF7 691 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 NAT9Q9BTE0 207 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 IL22Q9GZX6 179 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 ARHGEF38Q9NXL2 777 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 FAM8A1Q9UBU6 413 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 AFF4Q9UHB7 1163 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 TRIM43BA6NCK2 446 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 ZNF840PA6NDX5 716 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 RFPL2O75678 378 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 FGF18O76093 207 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 TARSP26639 723 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 HCAR3P49019 387 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 SERPINB9P50453 376 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 ARFIP2P53365 341 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 STX3Q13277 289 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 SPRED3Q2MJR0 410 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 RABGAP1LQ5R372 815 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 OTOAQ7RTW8 1153 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 ELMOD1Q8N336 334 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 BANPQ8N9N5 519 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 KLHL23Q8NBE8 558 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 ARNTL2Q8WYA1 636 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 TOP1MTQ969P6 601 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 WBP2Q969T9 261 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 TRIM43Q96BQ3 446 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 UBE2OQ9C0C9 1292 aaKnown RBP9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 PIDD1Q9HB75 910 aa9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 CXXC1Q9P0U4 656 aaPredicted RBP9.49□□□□□ -0.89
NUDCD3-203ENST00000460110 TMEM189-UBE2V1I3L0A0 370 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 DIAPH2O60879 1101 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 FGBP02675 491 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 SOD2P04179 222 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 MAGEA11P43364 429 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 BST1Q10588 318 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 STXBP5Q5T5C0 1151 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 MTDHQ86UE4 582 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 TDRPQ86YL5 185 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 CRLF3Q8IUI8 442 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 ING5Q8WYH8 240 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 DPF3Q92784 378 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 HDAC10Q969S8 669 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 TCF25Q9BQ70 676 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 CLIC5Q9NZA1 410 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 ARMCX1Q9P291 453 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 FAM237BA0A1B0GVD1 139 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 NEMP1O14524 444 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 SERPINF2P08697 491 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 CNPP09543 421 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 PAMP19021 973 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 EN2P19622 333 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 SLC6A4P31645 630 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 SERPINH1P50454 418 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 WDR5P61964 334 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 LBRQ14739 615 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 PTPRRQ15256 657 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 FSTL4Q6MZW2 842 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 NAT16Q8N8M0 369 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 RFWD2Q8NHY2 731 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 VPS39Q96JC1 886 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 CXorf56Q9H5V9 222 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 ECT2Q9H8V3 914 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 PPCSQ9HAB8 311 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 SNX15Q9NRS6 342 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 CFAP97Q9P2B7 532 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 MTRRQ9UBK8 725 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 HEY2Q9UBP5 337 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 UBA2Q9UBT2 640 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 RUVBL2Q9Y230 463 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 C5orf42Q9H799 3197 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 INPPL1O15357 1258 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 HSPA4LO95757 839 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 C8AP07357 584 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 MYL2P10916 166 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 CTPS1P17812 591 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 NCF2P19878 526 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 ABL2P42684 1182 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 NPY2RP49146 381 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 ALDH18A1P54886 795 aaKnown RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 CORO7P57737 925 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 IRF9Q00978 393 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 GNA12Q03113 381 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 CSHL1Q14406 222 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 PDK4Q16654 411 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 POM121L1PQ3SYA9 428 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 TAF1BQ53T94 588 aaPredicted RBP9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 SPANXN3Q5MJ09 141 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 NEPROQ6NW34 567 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 TAS2R42Q7RTR8 314 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 ACVR1CQ8NER5 493 aa9.48□□□□□ -0.89
NUDCD3-203ENST00000460110 TMEM237Q96Q45 408 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms