RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 IGLV1-44P01699 117 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 IGLV2-14P01704 120 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 AHSGP02765 367 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 F11P03951 625 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 CD3EP07766 207 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 MMP3P08254 477 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 CPN1P15169 458 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 PDE6AP16499 860 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ZNF12P17014 697 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ZNF17P17021 662 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 PSMB4P28070 264 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 SRIP30626 198 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 CHRNA3P32297 505 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 GRK4P32298 578 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 MCM5P33992 734 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 GPC1P35052 558 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 CRKLP46109 303 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 SEPHS1P49903 392 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 P2RY4P51582 365 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 CLCN4P51793 760 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 NDST2P52849 883 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 BRPF1P55201 1214 aaPredicted RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 RPS8P62241 208 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 RPL18AQ02543 176 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 TFF2Q03403 129 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 RELQ04864 619 aaPredicted RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 COASYQ13057 564 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 GPS2Q13227 327 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 BOP1Q14137 746 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 DOC2AQ14183 400 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ZMYND11Q15326 602 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 RGNQ15493 299 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 VPS72Q15906 364 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ZIC1Q15915 447 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ETFDHQ16134 617 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 MSS51Q4VC12 460 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 TTC39AQ5SRH9 613 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 GORABQ5T7V8 394 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ABHD17BQ5VST6 288 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 PRAMEF17Q5VTA0 474 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 TTLL5Q6EMB2 1281 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 TBC1D3CQ6IPX1 549 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 APOBEC3HQ6NTF7 200 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 JMJD6Q6NYC1 403 aaPredicted RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 CNNM4Q6P4Q7 775 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 SLC30A9Q6PML9 568 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 LVRNQ6Q4G3 990 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 PAOXQ6QHF9 649 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 IGF2-ASQ6U949 168 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 NXPE4Q6UWF7 544 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 TMIGD1Q6UXZ0 262 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 LCNL1Q6ZST4 164 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 BEND4Q6ZU67 534 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ZNF572Q7Z3I7 529 aaPredicted RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 TMC7Q7Z402 723 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 NT5DC3Q86UY8 548 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 PPFIBP1Q86W92 1011 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 SPATS2Q86XZ4 545 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ZC3H7AQ8IWR0 971 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 TBC1D3Q8IZP1 549 aaPredicted RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 PLPP7Q8NBV4 271 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 NFAM1Q8NET5 270 aaPredicted RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 IL27Q8NEV9 243 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 CIRBP-AS1Q8TBR5 109 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 GPT2Q8TD30 523 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 KCNG4Q8TDN1 519 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 AFAP1L1Q8TED9 768 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ITLN1Q8WWA0 313 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 BHMTQ93088 406 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 UBE2FQ969M7 185 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 MKL1Q969V6 931 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 FBXL20Q96IG2 436 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ZNF333Q96JL9 665 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 LRRC37BQ96QE4 947 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 CCT8L2Q96SF2 557 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 PITX2Q99697 317 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 RBM4BQ9BQ04 359 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 SEC22CQ9BRL7 303 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 MCRIP2Q9BUT9 160 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 VN1R3Q9BXE9 311 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 AMNQ9BXJ7 453 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 NAA50Q9GZZ1 169 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 R3HDMLQ9H3Y0 253 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 XKR8Q9H6D3 395 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 MVB12BQ9H7P6 319 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 PLEKHA1Q9HB21 404 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 USP29Q9HBJ7 922 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 RAVER2Q9HCJ3 691 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 PARD6AQ9NPB6 346 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 LTB4R2Q9NPC1 389 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 SIRT7Q9NRC8 400 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 LANCL2Q9NS86 450 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 ADAM22Q9P0K1 906 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 THEGQ9P2T0 379 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 STAP2Q9UGK3 403 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 XPO7Q9UIA9 1087 aaKnown RBP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 TRAK1Q9UPV9 953 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 PCDHA10Q9Y5I2 948 aa-1.92□□□□□ -2.72
SNORD54-201ENST00000459159 FAM215AQ9Y5M1 114 aa-1.92□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms