RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 HDAC6Q9UBN7 1215 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 PCDHA7Q9UN72 937 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 CNPY2Q9Y2B0 182 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 INSL5Q9Y5Q6 135 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 DGKBQ9Y6T7 804 aa3.21□□□□□ -1.9
SCARNA18-201ENST00000459004 DDTLA6NHG4 134 aaPredicted RBP3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 INAFM1C9JVW0 142 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 I6L893 689 aaPredicted RBP3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 EYA2O00167 538 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 VWA5AO00534 786 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 PEX12O00623 359 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 KLK10O43240 276 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 TPD52L2O43399 206 aaKnown RBP3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 RGS14O43566 566 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 EIF3JO75822 258 aaKnown RBP3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 ADAP00813 363 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 CHRM4P08173 479 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 GNLYP22749 145 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 TKTP29401 623 aaKnown RBP3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 PTPN9P43378 593 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 PMS2P54278 862 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 NANOS2P60321 138 aaKnown RBP3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 DSC1Q08554 894 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 GPS2Q13227 327 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 FBXO43Q4G163 708 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 FSCBQ5H9T9 825 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 WDR45BQ5MNZ6 344 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 PALB2Q86YC2 1186 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 RBFAQ8N0V3 343 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 FBXL14Q8N1E6 418 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 IQCF1Q8N6M8 205 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 TEX45Q8NA69 505 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 ZMIZ2Q8NF64 920 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 OR4N2Q8NGD1 307 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 MORC4Q8TE76 937 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 HSPH1Q92598 858 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 STAMQ92783 540 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 THOC3Q96J01 351 aaKnown RBP3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 PSMD1Q99460 953 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 CD180Q99467 661 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 ZPBPQ9BS86 351 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 DCLK3Q9C098 648 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 HIPK2Q9H2X6 1198 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 ENTPD7Q9NQZ7 604 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 FZD10Q9ULW2 581 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 SRPRBQ9Y5M8 271 aaKnown RBP3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 RAI2Q9Y5P3 530 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 PTGDR2Q9Y5Y4 395 aa3.2□□□□□ -1.9
SCARNA18-201ENST00000459004 IGKV2D-30A0A075B6S6 120 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 FAM90A7PA6NKC0 464 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 FAM90A22PA8MWA6 464 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 FAM90A12PA8MX19 464 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 FAM90A23PA8MXZ1 464 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 EIF3FO00303 357 aaPredicted RBP3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 IKBKBO14920 756 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 LIASO43766 372 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 CLDN7O95471 211 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 T-ENOLP0DO92 83 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 CKMT1AP12532 417 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 RFX5P48382 616 aaPredicted RBP3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 PPM1FP49593 454 aaPredicted RBP3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 UBE3AQ05086 875 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 CHRNDQ07001 517 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 Q0VFX4 171 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 BIRC3Q13489 604 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 ERV3-1Q14264 604 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 TAF12Q16514 161 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 SLC4A8Q2Y0W8 1093 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 IL20RBQ6UXL0 311 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 CYP26C1Q6V0L0 522 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 FAM83HQ6ZRV2 1179 aaPredicted RBP3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 Q6ZSV7 163 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 TRILQ7L0X0 811 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 MON1BQ7L1V2 547 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 PRSS45Q7RTY3 260 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 ZNF354CQ86Y25 554 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 CPOQ8IVL8 374 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 SMC5Q8IY18 1101 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 PRR26Q8N8Z3 221 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 DNAAF1Q8NEP3 725 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 TMEM170AQ8WVE7 144 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 HERVK_113Q902F9 699 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 ATOH1Q92858 354 aaPredicted RBP3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 MIB2Q96AX9 1013 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 APOLD1Q96LR9 279 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 CLSTN3Q9BQT9 956 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 ALKBH4Q9NXW9 302 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 WNT16Q9UBV4 365 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 MYO6Q9UM54 1294 aa3.19□□□□□ -1.9
SCARNA18-201ENST00000459004 C17orf113A0A1B0GUU1 675 aa3.18□□□□□ -1.9
SCARNA18-201ENST00000459004 A0A1B0GVT2 93 aa3.18□□□□□ -1.9
SCARNA18-201ENST00000459004 LACTBL1A8MY62 500 aa3.18□□□□□ -1.9
SCARNA18-201ENST00000459004 ASAP2O43150 1006 aa3.18□□□□□ -1.9
SCARNA18-201ENST00000459004 LDB2O43679 373 aa3.18□□□□□ -1.9
SCARNA18-201ENST00000459004 NGFRP08138 427 aa3.18□□□□□ -1.9
SCARNA18-201ENST00000459004 NAGAP17050 411 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms