RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 ZNF236Q9UL36 1845 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 MGAMO43451 1857 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 DNAJC25-GNG10A0A024R161 153 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 A0A087WXM4 84 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 SMIM28A0A1B0GU29 152 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZCWPW2A0A1B0GU75 182 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PRSS51A0A1B0GVH4 220 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 SMIM35A0A1B0GVV1 85 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 KANSL1LA0AUZ9 987 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 RBM47A0AV96 593 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 UNCXA6NJT0 531 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 TK2O00142 265 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 KCNK1O00180 336 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PSMD12O00232 456 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 DFFAO00273 331 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 SOCS7O14512 581 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF195O14628 629 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 MRASO14807 208 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ANGPT2O15123 496 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PFDN6O15212 129 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZBTB24O43167 697 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PHGDHO43175 533 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 HNRNPRO43390 633 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 AKAP10O43572 662 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZBTB14O43829 449 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 DNAJA2O60884 412 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 CLASP2O75122 1294 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 VPS4BO75351 444 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 CRCPO75575 148 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZMPSTE24O75844 475 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 UPP2O95045 317 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PGM3O95394 542 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 CHEK2O96017 543 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 GSRP00390 522 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 JCHAINP01591 159 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 LTFP02788 710 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ASLP04424 464 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 C8BP07358 591 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 CHRNGP07510 517 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 MMP3P08254 477 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 SNRPB2P08579 225 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 MYL3P08590 195 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 LTA4HP09960 611 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 IQCF3P0C7M6 154 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC35E2BP0CK96 405 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCDC166P0CW27 439 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 C7P10643 843 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 NCAM1P13591 858 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 DARSP14868 501 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 CPB1P15086 417 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATP6V1B1P15313 513 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 YBX3P16989 372 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PTPN1P18031 435 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 XRCC1P18887 633 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 TFEBP19484 476 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 TFE3P19532 575 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 IL10P22301 178 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PAX3P23760 479 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 CCNCP24863 283 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PSMA4P25789 261 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 EPHA3P29320 983 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC7A1P30825 629 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 TTKP33981 857 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 AVPR1AP37288 418 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 RANBP1P43487 201 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 GLRBP48167 497 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 THOP1P52888 689 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATXN1P54253 815 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 NAGLUP54802 743 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PKNOX1P55347 436 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 MAP3K7CLP57077 242 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 NUP107P57740 925 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 DAOAP59103 153 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 TUBA4AP68366 448 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 TXNL4AP83876 142 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 IRF9Q00978 393 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 FOXM1Q08050 763 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 GALNT1Q10472 559 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 DCTN2Q13561 401 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PEX6Q13608 980 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 TRIM25Q14258 630 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 FASTKQ14296 549 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 TLR1Q15399 786 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 CYTH1Q15438 398 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 MAPRE1Q15691 268 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 SMAD1Q15797 465 aaKnown RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 GEN1Q17RS7 908 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF423Q2M1K9 1284 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 KIZQ2M2Z5 673 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 KIF19Q2TAC6 998 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 SPATS1Q496A3 300 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 AASDHQ4L235 1098 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 PIGGQ5H8A4 983 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ARL13AQ5H913 290 aaPredicted RBP3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 BRMS1LQ5PSV4 323 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 CERCAMQ5T4B2 595 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 KCTD11Q693B1 232 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 REP15Q6BDI9 236 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF470Q6ECI4 717 aa3.37□□□□□ -1.87
HMGN1P18-201ENST00000457642 TWF2Q6IBS0 349 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms