RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CHD8Q9HCK8 2581 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 LRRC72A6NJI9 287 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 H3BRJ5 948 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 GJB3O75712 270 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 MTA2O94776 668 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 PROSCO94903 275 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 PRNPP04156 253 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 CTSLP07711 333 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 RARAP10276 462 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 ERCC2P18074 760 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 CSRP1P21291 193 aaKnown RBP17.66■□□□□ 0.42
USP39-208ENST00000455732 ATXN3P54252 364 aaPredicted RBP17.66■□□□□ 0.42
USP39-208ENST00000455732 ADPRHP54922 357 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 GRIK2Q13002 908 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 SMTNL2Q2TAL5 461 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 INO80DQ53TQ3 878 aaPredicted RBP17.66■□□□□ 0.42
USP39-208ENST00000455732 AFMIDQ63HM1 303 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 DPY19L3Q6ZPD9 716 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 OR2I1PQ8NGU4 316 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 OR2T34Q8NGX1 318 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 ORAI3Q9BRQ5 295 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 TNKS2Q9H2K2 1166 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 KDM4CQ9H3R0 1056 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 DNAAF2Q9NVR5 837 aaKnown RBP17.66■□□□□ 0.42
USP39-208ENST00000455732 INTUQ9ULD6 942 aa17.66■□□□□ 0.42
USP39-208ENST00000455732 TPX2Q9ULW0 747 aaKnown RBP17.66■□□□□ 0.42
USP39-208ENST00000455732 FCF1Q9Y324 198 aaKnown RBP17.66■□□□□ 0.42
USP39-208ENST00000455732 UPK3BL1B0FP48 263 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 UPK3BL2E5RIL1 263 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 DAPK3O43293 454 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 BNIP3LO60238 219 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 GSRP00390 522 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 IGHV4-34P06331 123 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 FECHP22830 423 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 ARL4AP40617 200 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 METAP1P53582 386 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 BNC1Q01954 994 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 TCEAL1Q15170 157 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 HADHQ16836 314 aaKnown RBP17.65■□□□□ 0.42
USP39-208ENST00000455732 CARD16Q5EG05 197 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 N4BP2L1Q5TBK1 243 aaPredicted RBP17.65■□□□□ 0.42
USP39-208ENST00000455732 AGBL4Q5VU57 503 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 KIAA0895LQ68EN5 471 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 TXNRD3NBQ6F5E7 133 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 PSAPL1Q6NUJ1 521 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 POLNQ7Z5Q5 900 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 RHOT2Q8IXI1 618 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 LZTR1Q8N653 840 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 CHST14Q8NCH0 376 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 FAM71BQ8TC56 605 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 SNX19Q92543 992 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 TSC1Q92574 1164 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 HSPH1Q92598 858 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 PANX2Q96RD6 677 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 ANP32EQ9BTT0 268 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 ZDHHC5Q9C0B5 715 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 OSGEPQ9NPF4 335 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 RCOR3Q9P2K3 495 aaPredicted RBP17.65■□□□□ 0.42
USP39-208ENST00000455732 IL36AQ9UHA7 158 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 ACTL7AQ9Y615 435 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 WASF2Q9Y6W5 498 aa17.65■□□□□ 0.42
USP39-208ENST00000455732 ARHGAP42A6NI28 874 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 GIPC1O14908 333 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 PLRG1O43660 514 aaKnown RBP17.64■□□□□ 0.41
USP39-208ENST00000455732 BUB1O43683 1085 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 OPHN1O60890 802 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 TMCC1O94876 653 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 FSBPO95073 299 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 LCA5LO95447 670 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 CEACAM1P13688 526 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 CD27P26842 260 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 NOVA1P51513 510 aaKnown RBP17.64■□□□□ 0.41
USP39-208ENST00000455732 CCNHP51946 323 aaPredicted RBP17.64■□□□□ 0.41
USP39-208ENST00000455732 NCEH1Q6PIU2 408 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 PIP4P1Q86T03 277 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 ZNF354CQ86Y25 554 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 ARHGAP12Q8IWW6 846 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 CCDC170Q8IYT3 715 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 RFFLQ8WZ73 363 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 CSPG4P5Q96PW8 444 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 HEPHQ9BQS7 1158 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 PDFQ9HBH1 243 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 PCDH18Q9HCL0 1135 aa17.64■□□□□ 0.41
USP39-208ENST00000455732 PRAMEF11O60813 436 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 ARHGAP25P42331 645 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 CCR5P51681 352 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 ARSEP51690 589 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 SNRPD1P62314 119 aaKnown RBP17.63■□□□□ 0.41
USP39-208ENST00000455732 CCDC15Q0P6D6 951 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 CNTN1Q12860 1018 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 PIP5KL1Q5T9C9 394 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 NPWQ8N729 165 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 OR2AP1Q8NGE2 309 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 OR14C36Q8NHC7 312 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 SLC35G2Q8TBE7 412 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 GRIN3AQ8TCU5 1115 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 PPP1R16AQ96I34 528 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 CELF6Q96J87 481 aaKnown RBP17.63■□□□□ 0.41
USP39-208ENST00000455732 LRIG1Q96JA1 1093 aa17.63■□□□□ 0.41
USP39-208ENST00000455732 HDAC8Q9BY41 377 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms