RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 AP1S1P61966 158 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 CDK18Q07002 472 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 ZNF235Q14590 738 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 KBTBD12Q3ZCT8 623 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 ANKRD20A4Q4UJ75 823 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 ALFQ53S48 1182 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 FAM117BQ6P1L5 589 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 KYAT3Q6YP21 454 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 C7orf61Q8IZ16 206 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 SH2D3CQ8N5H7 860 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 FIBINQ8TAL6 211 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 GPR152Q8TDT2 470 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 DENND1AQ8TEH3 1009 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 POF1BQ8WVV4 589 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 CKAP2Q8WWK9 683 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 TMA16Q96EY4 203 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 CHMP6Q96FZ7 201 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 NUDCD1Q96RS6 583 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 GORASP1Q9BQQ3 440 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 CEP44Q9C0F1 390 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 MPP6Q9NZW5 540 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 MARK1Q9P0L2 795 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 DNMT3BQ9UBC3 853 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 DCDC2Q9UHG0 476 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 VPS9D1Q9Y2B5 631 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 ANKRD6Q9Y2G4 727 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 SH3BP1Q9Y3L3 701 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 ZFP37Q9Y6Q3 630 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 GBF1Q92538 1859 aa6.94□□□□□ -1.3
ECHDC1-210ENST00000454859 HTTP42858 3142 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 TMEM120BA0PK00 339 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 POC1B-GALNT4F8VUJ3 575 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 KLF11O14901 512 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 BIRC5O15392 142 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 SLC7A4O43246 635 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 HLA-DQB2P05538 268 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 ATP5BP06576 529 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 MGAT1P26572 445 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 HOXD9P28356 352 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 SLC6A4P31645 630 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 CRHR1P34998 444 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 SLC26A3P40879 764 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 CCT5P48643 541 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 SERPINH1P50454 418 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 KCNQ1P51787 676 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 PTPN5P54829 565 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 ACVR1Q04771 509 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 TMED2Q15363 201 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 CASC4Q6P4E1 433 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 DENND1CQ8IV53 801 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 IGDCC3Q8IVU1 814 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 RAVER1Q8IY67 606 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 BANPQ8N9N5 519 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 DEPDC1BQ8WUY9 529 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 CFAP36Q96G28 342 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 OXNAD1Q96HP4 312 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 APOPT1Q96IL0 206 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 CELF6Q96J87 481 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 PWWP2AQ96N64 755 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 ADGRE3Q9BY15 652 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 RNF38Q9H0F5 515 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 TCAF1Q9Y4C2 921 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 SNX10Q9Y5X0 201 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 RPS6KL1Q9Y6S9 549 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 KIF26AQ9ULI4 1882 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 PFDN6O15212 129 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 CLASP2O75122 1294 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 CNTN5O94779 1100 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 NDST3O95803 873 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 KLKB1P03952 638 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 CHN1P15882 459 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 MAGEA12P43365 314 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 KPNA2P52292 529 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 WNT3AP56704 352 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 DMTNQ08495 405 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 SEPT7Q16181 437 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 DENND5AQ6IQ26 1287 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 TMEM184AQ6ZMB5 413 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 SH2D5Q6ZV89 423 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 GAREM2Q75VX8 874 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 YTHDF3Q7Z739 585 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 TAX1BP1Q86VP1 789 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 SRRM1Q8IYB3 904 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 KIRREL3Q8IZU9 778 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 MPP5Q8N3R9 675 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 GPR150Q8NGU9 434 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 ARRDC2Q8TBH0 407 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 ZNF398Q8TD17 642 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 HCAR2Q8TDS4 363 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 MRGPRX2Q96LB1 330 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 TUBGCP5Q96RT8 1024 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 TCF12Q99081 682 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 CINPQ9BW66 212 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 ZNF334Q9HCZ1 680 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 DNAJC17Q9NVM6 304 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 CXXC1Q9P0U4 656 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 ZFATQ9P243 1243 aa6.93□□□□□ -1.3
ECHDC1-210ENST00000454859 NUDT5Q9UKK9 219 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms