RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ARL13AQ5H913 290 aaPredicted RBP11.33□□□□□ -0.6
DDR1-240ENST00000454612 DNAJC14Q6Y2X3 702 aaPredicted RBP11.33□□□□□ -0.6
DDR1-240ENST00000454612 MIER2Q8N344 545 aa11.33□□□□□ -0.6
DDR1-240ENST00000454612 ARRDC4Q8NCT1 418 aa11.33□□□□□ -0.6
DDR1-240ENST00000454612 TUBGCP3Q96CW5 907 aa11.33□□□□□ -0.6
DDR1-240ENST00000454612 GATA5Q9BWX5 397 aaPredicted RBP11.33□□□□□ -0.6
DDR1-240ENST00000454612 POMKQ9H5K3 350 aa11.33□□□□□ -0.6
DDR1-240ENST00000454612 CCDC134Q9H6E4 229 aa11.33□□□□□ -0.6
DDR1-240ENST00000454612 DMAP1Q9NPF5 467 aaPredicted RBP11.33□□□□□ -0.6
DDR1-240ENST00000454612 SAR1AQ9NR31 198 aa11.33□□□□□ -0.6
DDR1-240ENST00000454612 NDFIP2Q9NV92 336 aa11.33□□□□□ -0.6
DDR1-240ENST00000454612 GIMAP2Q9UG22 337 aa11.33□□□□□ -0.6
DDR1-240ENST00000454612 BTRCQ9Y297 605 aa11.33□□□□□ -0.6
DDR1-240ENST00000454612 DTNAQ9Y4J8 743 aa11.33□□□□□ -0.6
DDR1-240ENST00000454612 ARHGAP10A1A4S6 786 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 ZBBXA8MT70 800 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 NR5A2O00482 541 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 PLIN3O60664 434 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 KATNA1O75449 491 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 RFPL1O75677 317 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 IL4RP24394 825 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 PSMD7P51665 324 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 PRKD1Q15139 912 aaPredicted RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 KYAT1Q16773 422 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 WASHC2DQ5SRD0 308 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 IRGCQ6NXR0 463 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 DRICH1Q6PGQ1 229 aaPredicted RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 NT5DC4Q86YG4 428 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 OR6K2Q8NGY2 324 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 CASP10Q92851 521 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 APOL5Q9BWW9 433 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 FAM96AQ9H5X1 160 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 EGFL7Q9UHF1 273 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 IPO11Q9UI26 975 aaKnown RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 A0A0U1RQS6 177 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 BAIAP3O94812 1187 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 ATP6V1C1P21283 382 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 PNPLA4P41247 253 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 GALK1P51570 392 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 COL9A2Q14055 689 aaPredicted RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 GALNT3Q14435 633 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 GK5Q6ZS86 529 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 ACVR1CQ8NER5 493 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 ZNF184Q99676 751 aaPredicted RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 SLC39A3Q9BRY0 314 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 C16orf70Q9BSU1 422 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 MRPL1Q9BYD6 325 aaKnown RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 COPG2Q9UBF2 871 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 PRKAG3Q9UGI9 489 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 E5RI56 91 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 SMAPO00193 183 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 CBX4O00257 560 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 GMNNO75496 209 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 DLDP09622 509 aaKnown RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 PTPN3P26045 913 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 PEX2P28328 305 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 PLOD1Q02809 727 aaPredicted RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 CDH17Q12864 832 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 PSMD5Q16401 504 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 ZRANB3Q5FWF4 1079 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 CLEC20AQ6ZU45 233 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 RAB44Q7Z6P3 723 aaPredicted RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 TMEM110Q86TL2 294 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 SIX5Q8N196 739 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 FCRL3Q96P31 734 aaPredicted RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 FRMD8P1Q9BZ68 369 aaPredicted RBP11.32□□□□□ -0.6
DDR1-240ENST00000454612 FAM105AQ9NUU6 356 aa11.32□□□□□ -0.6
DDR1-240ENST00000454612 LIN7AO14910 233 aaPredicted RBP11.31□□□□□ -0.6
DDR1-240ENST00000454612 GUCA1CO95843 209 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 CES1P23141 567 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 HOXA11P31270 313 aaPredicted RBP11.31□□□□□ -0.6
DDR1-240ENST00000454612 NR2C2P49116 596 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 ESRRGP62508 458 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 RBBP7Q16576 425 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 MAP3K21Q5TCX8 1036 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 SLC26A9Q7LBE3 791 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 TDRPQ86YL5 185 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 FBXO32Q969P5 355 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 SNX27Q96L92 541 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 EGFL8Q99944 293 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 SCN4AP35499 1836 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 NRCAMQ92823 1304 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 RBM47A0AV96 593 aaKnown RBP11.31□□□□□ -0.6
DDR1-240ENST00000454612 TCEA3O75764 348 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 PFKMP08237 780 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 COX4I1P13073 169 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 GPR15P49685 360 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 CPT1AP50416 773 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 CLDN10P78369 228 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 TIGD5Q53EQ6 642 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 FAM171A1Q5VUB5 890 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 NEPROQ6NW34 567 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 GLB1LQ6UWU2 654 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 TAC4Q86UU9 113 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 APLFQ8IW19 511 aaPredicted RBP11.31□□□□□ -0.6
DDR1-240ENST00000454612 NIPA2Q8N8Q9 360 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 BHLHE22Q8NFJ8 381 aaPredicted RBP11.31□□□□□ -0.6
DDR1-240ENST00000454612 SEPHS2Q99611 448 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 NUMBLQ9Y6R0 609 aa11.31□□□□□ -0.6
DDR1-240ENST00000454612 BCLAF3A2AJT9 711 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms