RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 HLA-DRAP01903 254 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 CTSLP07711 333 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 PFN3P60673 137 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 CDC20Q12834 499 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 NAA30Q147X3 362 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 C16orf72Q14CZ0 275 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 ELOCQ15369 112 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 CCDC73Q6ZRK6 1079 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 C12orf56Q8IXR9 622 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 CCDC13Q8IYE1 715 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 FSTL5Q8N475 847 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 KCTD13Q8WZ19 329 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 KLF6Q99612 283 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 HDAC8Q9BY41 377 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 GPN2Q9H9Y4 310 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 CGNQ9P2M7 1197 aaKnown RBP12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 TFIP11Q9UBB9 837 aaKnown RBP12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 GPR34Q9UPC5 381 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 DAAM1Q9Y4D1 1078 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 PCDHGA3Q9Y5H0 932 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 ZFHX3Q15911 3703 aa12.86□□□□□ -0.35
AC004540.1-204ENST00000449537 MKRN2OSH3BPM6 223 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 TULP2O00295 520 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 STAT6P42226 847 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 PIK3CAP42336 1068 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 ARSDP51689 593 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 DLG4P78352 724 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 PPARDQ03181 441 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 ADIGQ0VDE8 80 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 ARHGAP17Q68EM7 881 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 ATL3Q6DD88 541 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 SLITRK4Q8IW52 837 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 SIX6OS1Q8N1H7 587 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 PCDH19Q8TAB3 1148 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 PRR7Q8TB68 274 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 KIAA1143Q96AT1 154 aaPredicted RBP12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 EFHD1Q9BUP0 239 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 IMPG2Q9BZV3 1241 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 SEMA6CQ9H3T2 930 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 APPL1Q9UKG1 709 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 MTMR6Q9Y217 621 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 HIVEP3Q5T1R4 2406 aa12.85□□□□□ -0.35
AC004540.1-204ENST00000449537 XPO1O14980 1071 aaKnown RBP12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 SPTLC2O15270 562 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 RAD1O60671 282 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 PRNPP04156 253 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 CELA2BP08218 269 aaPredicted RBP12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 ALPIP09923 528 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 FGF3P11487 239 aaPredicted RBP12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 CTSEP14091 401 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 OAS2P29728 719 aaKnown RBP12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 BLKP51451 505 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 MC1RQ01726 317 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 EFHC2Q5JST6 749 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 TIPARPQ7Z3E1 657 aaKnown RBP12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 TATDN2Q93075 761 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 FCRL2Q96LA5 508 aaPredicted RBP12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 CCDC114Q96M63 670 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 C1QTNF2Q9BXJ5 285 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 APOBEC3GQ9HC16 384 aaKnown RBP12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 CNGB3Q9NQW8 809 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 CHMP5Q9NZZ3 219 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 PNMA8BQ9ULN7 279 aaPredicted RBP12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 CSMD1Q96PZ7 3565 aa12.84□□□□□ -0.35
AC004540.1-204ENST00000449537 PCNX1Q96RV3 2341 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 IGLON5A6NGN9 336 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 IKBKBO14920 756 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 MOCS2O96007 188 aaPredicted RBP12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 F13A1P00488 732 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 LDLRP01130 860 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 GLB1P16278 677 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 COPB1P53618 953 aaKnown RBP12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 DAOAP59103 153 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 ARHGEF7Q14155 803 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 FAM26FQ5R3K3 315 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 RAP1GAP2Q684P5 730 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 C16orf46Q6P387 395 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 PIM3Q86V86 326 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 ZSCAN30Q86W11 494 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 GKN2Q86XP6 184 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 CCAR2Q8N163 923 aaKnown RBP12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 SCML4Q8N228 414 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 SH2D3CQ8N5H7 860 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 SLC4A11Q8NBS3 891 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 OR2A12Q8NGT7 310 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 PPP1R16AQ96I34 528 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 FEM1AQ9BSK4 669 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 LRRC27Q9C0I9 530 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 NIF3L1Q9GZT8 377 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 INTS2Q9H0H0 1204 aaKnown RBP12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 TLR6Q9Y2C9 796 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 MAP4K5Q9Y4K4 846 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 KCTD3Q9Y597 815 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 B3GALT1Q9Y5Z6 326 aa12.83□□□□□ -0.36
AC004540.1-204ENST00000449537 RNF103O00237 685 aa12.82□□□□□ -0.36
AC004540.1-204ENST00000449537 HGSO14964 777 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms