RNA–Protein interactions for RNA: ENST00000448786.1

AC007879.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC007879.3, Length 823 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.3-202ENST00000448786 XRN1Q8IZH2 1706 aaKnown RBP3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 TRBV5-7A0A0A0MS05 114 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 MBD3L5A6NJ08 208 aaPredicted RBP3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 PRSS47A8MTI9 375 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 I6L893 689 aaPredicted RBP3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 HLA-DQA2P01906 255 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 TRIM27P14373 513 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 HOXB9P17482 250 aaPredicted RBP3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 KLRK1P26718 216 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 AVPR1AP37288 418 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 RFX5P48382 616 aaPredicted RBP3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 PCP4P48539 62 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 CLCN5P51795 746 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 TMPRSS3P57727 454 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 ERVFC1-1P60608 527 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 SEC61A1P61619 476 aaKnown RBP3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 SF3A3Q12874 501 aaKnown RBP eCLIP3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 LONRF1Q17RB8 773 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 MPEG1Q2M385 716 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 CCDC181Q5TID7 509 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 FAM171A1Q5VUB5 890 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 HEPHL1Q6MZM0 1159 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 Q6ZSV7 163 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 FJX1Q86VR8 437 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 OR2C3Q8N628 320 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 TMEM217Q8N7C4 229 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 ENDOVQ8N8Q3 282 aaKnown RBP3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 PJA1Q8NG27 643 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 CLEC4CQ8WTT0 213 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 HMGB4Q8WW32 186 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 ADAMTS14Q8WXS8 1223 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 CCDC138Q96M89 665 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 DUX5Q96PT3 197 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 KLHL42Q9P2K6 505 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 IL36RNQ9UBH0 155 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 SLC25A13Q9UJS0 675 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 CROCC2H7BZ55 1655 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 BLMP54132 1417 aaPredicted RBP3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 C1orf167Q5SNV9 1468 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 BCL9LQ86UU0 1499 aa3.67□□□□□ -1.82
AC007879.3-202ENST00000448786 LRP5O75197 1615 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 CFAP65Q6ZU64 1925 aaKnown RBP3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 TCRBV7S3A2A0A539 114 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 PLSCR5A0PG75 271 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 CLEC18AA5D8T8 446 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 CYSRT1A8MQ03 144 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 SMTNL1A8MU46 457 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 ERVV-2B6SEH9 535 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 GRID2O43424 1007 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 DNPH1O43598 174 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 PLA2G6O60733 806 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 NBPF7P0C2Y1 421 aaPredicted RBP3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 PMS2P54278 862 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 RHAGQ02094 409 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 HLTFQ14527 1009 aaKnown RBP eCLIP3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 TBRG1Q3YBR2 411 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 PLK5Q496M5 336 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 VWA5B1Q5TIE3 1220 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 C8orf82Q6P1X6 216 aaPredicted RBP3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 SLC30A9Q6PML9 568 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 H1FNTQ75WM6 255 aaPredicted RBP3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 C16orf82Q7Z2V1 217 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 ZNF329Q86UD4 541 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 HORMAD2Q8N7B1 307 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 CLEC18CQ8NCF0 446 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 FAM110DQ8TAY7 271 aaPredicted RBP3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 SLC35F5Q8WV83 523 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 APOLD1Q96LR9 279 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 STK33Q9BYT3 514 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 TP63Q9H3D4 680 aaPredicted RBP3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 HIPK3Q9H422 1215 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 RETREG1Q9H6L5 497 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 LIN7CQ9NUP9 197 aaKnown RBP3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 PKP3Q9Y446 797 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 PCDHGB2Q9Y5G2 931 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 UNC13BO14795 1591 aa3.66□□□□□ -1.82
AC007879.3-202ENST00000448786 ROCK1Q13464 1354 aa3.65□□□□□ -1.82
AC007879.3-202ENST00000448786 A0A1B0GUV1 79 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 TMEM247A6NEH6 219 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 SLC38A8A6NNN8 435 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 KCNJ13O60928 360 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 TMCC1O94876 653 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 ZBTB11O95625 1053 aaPredicted RBP3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 MYZAPP0CAP1 466 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 NUDT6P53370 316 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 RCAN1P53805 252 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 FAM3BP58499 235 aaPredicted RBP3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 KIF5AQ12840 1032 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 COASYQ13057 564 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 SLC39A14Q15043 492 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 C5orf22Q49AR2 442 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 OTUD3Q5T2D3 398 aaPredicted RBP3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 C9orf57Q5W0N0 161 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 CLIP4Q8N3C7 705 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 WFIKKN2Q8TEU8 576 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 FAM216AQ8WUB2 273 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 GFM1Q96RP9 751 aaKnown RBP3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 MECRQ9BV79 373 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 C1QTNF4Q9BXJ3 329 aa3.65□□□□□ -1.83
AC007879.3-202ENST00000448786 ZNF556Q9HAH1 456 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms