RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 GIMD1P0DJR0 217 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 HDCP19113 662 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 CD38P28907 300 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 OAS2P29728 719 aaKnown RBP5.26□□□□□ -1.57
SDCBP-205ENST00000447267 COPAP53621 1224 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 BCAT1P54687 386 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 PTENP60484 403 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 KRT83P78385 493 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 ALX1Q15699 326 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 HSP90AB4PQ58FF6 505 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 EMC4Q5J8M3 183 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 FAM26FQ5R3K3 315 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 IFIT1BQ5T764 474 aaKnown RBP5.26□□□□□ -1.57
SDCBP-205ENST00000447267 CLEC9AQ6UXN8 241 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 ZNF517Q6ZMY9 492 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-205ENST00000447267 ANO5Q75V66 913 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 EFL1Q7Z2Z2 1120 aaKnown RBP5.26□□□□□ -1.57
SDCBP-205ENST00000447267 CCDC13Q8IYE1 715 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 TRMT2AQ8IZ69 625 aaKnown RBP5.26□□□□□ -1.57
SDCBP-205ENST00000447267 APPL2Q8NEU8 664 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 OR4C6Q8NH72 309 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 SKA1Q96BD8 255 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 GRAMD1AQ96CP6 724 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 HDAC11Q96DB2 347 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 UROC1Q96N76 676 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 CATSPER2Q96P56 530 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 SLC29A3Q9BZD2 475 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 TRIM9Q9C026 710 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 PCED1AQ9H1Q7 454 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 TBC1D22BQ9NU19 505 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 COPG2Q9UBF2 871 aa5.26□□□□□ -1.57
SDCBP-205ENST00000447267 PNMA8BQ9ULN7 279 aaPredicted RBP5.26□□□□□ -1.57
SDCBP-205ENST00000447267 IGLV3-22A0A075B6J6 115 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 A0A1W2PPC4 97 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 ANKUB1A6NFN9 424 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 DLX3O60479 287 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 SORBS2O94875 1100 aaKnown RBP5.25□□□□□ -1.57
SDCBP-205ENST00000447267 OAZ2O95190 189 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 PLATP00750 562 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 CT47B1P0C2W7 299 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-205ENST00000447267 JMJD7P0C870 316 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 DGKAP23743 735 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 SSTR2P30874 369 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 HSPA4P34932 840 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 MAPK10P53779 464 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 YWHAHQ04917 246 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-205ENST00000447267 GAD2Q05329 585 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 LSAMPQ13449 338 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 DHX8Q14562 1220 aaKnown RBP5.25□□□□□ -1.57
SDCBP-205ENST00000447267 STARD3Q14849 445 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 KIF26BQ2KJY2 2108 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 ANO4Q32M45 955 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 SLC39A12Q504Y0 691 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 HS1BP3Q53T59 392 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 CCDC178Q5BJE1 867 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 MIIPQ5JXC2 388 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 JAKMIP3Q5VZ66 844 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 GUSBP11Q6P575 273 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 TEPPQ6URK8 271 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 LIMS2Q7Z4I7 341 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 BIVMQ86UB2 503 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 TMEM25Q86YD3 366 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 RBM12BQ8IXT5 1001 aaKnown RBP5.25□□□□□ -1.57
SDCBP-205ENST00000447267 C18orf25Q96B23 403 aaPredicted RBP5.25□□□□□ -1.57
SDCBP-205ENST00000447267 LZTS2Q9BRK4 669 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 TMEM206Q9H813 350 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 SMPD4Q9NXE4 827 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 DTLQ9NZJ0 730 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 MYO18AQ92614 2054 aaKnown RBP5.25□□□□□ -1.57
SDCBP-205ENST00000447267 SHANK1Q9Y566 2161 aa5.25□□□□□ -1.57
SDCBP-205ENST00000447267 TACC2O95359 2948 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-205ENST00000447267 MROH6A6NGR9 719 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 ZNF891A8MT65 544 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-205ENST00000447267 MKRN2OSH3BPM6 223 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 H7BY64 318 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 HGSO14964 777 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-205ENST00000447267 PPP6R2O75170 966 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 NEBLO76041 1014 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 CPP00450 1065 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 TUFMP49411 452 aaKnown RBP5.24□□□□□ -1.57
SDCBP-205ENST00000447267 IST1P53990 364 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 ZNF177Q13360 481 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-205ENST00000447267 NTRK3Q16288 839 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 FXNQ16595 210 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 PHF19Q5T6S3 580 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 BTBD8Q5XKL5 378 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 STEAP3Q658P3 488 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 KIAA0895LQ68EN5 471 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 GRAMD4Q6IC98 578 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 CHDHQ8NE62 594 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-205ENST00000447267 SCFD1Q8WVM8 642 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 NRGNQ92686 78 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 FRAT1Q92837 279 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-205ENST00000447267 ZMAT2Q96NC0 199 aaKnown RBP5.24□□□□□ -1.57
SDCBP-205ENST00000447267 JAM3Q9BX67 310 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 ANO3Q9BYT9 981 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 BTBD1Q9H0C5 482 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 UNC45AQ9H3U1 944 aa5.24□□□□□ -1.57
SDCBP-205ENST00000447267 RPF1Q9H9Y2 349 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms