RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 BTBD6Q96KE9 485 aa15.03■□□□□ -0
USE1-202ENST00000445667 CAMK1GQ96NX5 476 aa15.03■□□□□ -0
USE1-202ENST00000445667 KDM4CQ9H3R0 1056 aa15.03■□□□□ -0
USE1-202ENST00000445667 ZDHHC6Q9H6R6 413 aa15.03■□□□□ -0
USE1-202ENST00000445667 DYRK4Q9NR20 520 aa15.03■□□□□ -0
USE1-202ENST00000445667 AASDHPPTQ9NRN7 309 aa15.03■□□□□ -0
USE1-202ENST00000445667 UPK3BL1B0FP48 263 aa15.02■□□□□ -0
USE1-202ENST00000445667 UPK3BL2E5RIL1 263 aa15.02■□□□□ -0
USE1-202ENST00000445667 FGF10O15520 208 aaPredicted RBP15.02■□□□□ -0
USE1-202ENST00000445667 DAPK3O43293 454 aa15.02■□□□□ -0
USE1-202ENST00000445667 SH3BP5O60239 455 aa15.02■□□□□ -0
USE1-202ENST00000445667 CER1O95813 267 aa15.02■□□□□ -0
USE1-202ENST00000445667 WNT1P04628 370 aa15.02■□□□□ -0
USE1-202ENST00000445667 IL1R2P27930 398 aa15.02■□□□□ -0
USE1-202ENST00000445667 HNRNPH3P31942 346 aaKnown RBP15.02■□□□□ -0
USE1-202ENST00000445667 GEMIN4P57678 1058 aaKnown RBP15.02■□□□□ -0
USE1-202ENST00000445667 SERINC3Q13530 473 aa15.02■□□□□ -0
USE1-202ENST00000445667 PPP6R3Q5H9R7 873 aaPredicted RBP15.02■□□□□ -0
USE1-202ENST00000445667 PRAMEF14Q5SWL7 426 aa15.02■□□□□ -0
USE1-202ENST00000445667 IL27RAQ6UWB1 636 aa15.02■□□□□ -0
USE1-202ENST00000445667 ERN2Q76MJ5 926 aaKnown RBP15.02■□□□□ -0
USE1-202ENST00000445667 PRPF39Q86UA1 669 aaKnown RBP15.02■□□□□ -0
USE1-202ENST00000445667 UMODL1-AS1Q8N2C9 162 aa15.02■□□□□ -0
USE1-202ENST00000445667 OR8K1Q8NGG5 319 aa15.02■□□□□ -0
USE1-202ENST00000445667 KLK6Q92876 244 aa15.02■□□□□ -0
USE1-202ENST00000445667 ISG20Q96AZ6 181 aaKnown RBP15.02■□□□□ -0
USE1-202ENST00000445667 SERAC1Q96JX3 654 aa15.02■□□□□ -0
USE1-202ENST00000445667 NUP85Q9BW27 656 aa15.02■□□□□ -0
USE1-202ENST00000445667 SLC32A1Q9H598 525 aa15.02■□□□□ -0
USE1-202ENST00000445667 FNDC3AQ9Y2H6 1198 aaKnown RBP15.02■□□□□ -0
USE1-202ENST00000445667 ASCC3Q8N3C0 2202 aaKnown RBP15.01□□□□□ -0.01
USE1-202ENST00000445667 CXorf51AA0A1B0GTR3 108 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 LATO43561 262 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 RNGTTO60942 597 aaKnown RBP15.01□□□□□ -0.01
USE1-202ENST00000445667 TMCC1O94876 653 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 CYP1A2P05177 515 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 CD38P28907 300 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 HTR7P34969 479 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 C21orf59P57076 290 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 FAM193AP78312 1265 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 SLC14A1Q13336 389 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 ACAP1Q15027 740 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 SMTNL2Q2TAL5 461 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 PARP15Q460N3 678 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 ATXN7L2Q5T6C5 722 aaPredicted RBP15.01□□□□□ -0.01
USE1-202ENST00000445667 VSTM4Q8IW00 320 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 PLPP6Q8IY26 295 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 HDAC8Q9BY41 377 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 SLC39A8Q9C0K1 460 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 LRRC19Q9H756 370 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 ZWILCHQ9H900 591 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 TM7SF3Q9NS93 570 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 ANAPC7Q9UJX3 599 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 PLXNA2O75051 1894 aa15.01□□□□□ -0.01
USE1-202ENST00000445667 CHD5Q8TDI0 1954 aa15□□□□□ -0.01
USE1-202ENST00000445667 SPAARA0A1B0GVQ0 90 aa15□□□□□ -0.01
USE1-202ENST00000445667 A0A1W2PR77 199 aa15□□□□□ -0.01
USE1-202ENST00000445667 ZSCAN5CA6NGD5 496 aaPredicted RBP15□□□□□ -0.01
USE1-202ENST00000445667 EIF3CLB5ME19 914 aaKnown RBP15□□□□□ -0.01
USE1-202ENST00000445667 H0Y8X5 98 aa15□□□□□ -0.01
USE1-202ENST00000445667 J3KR12 359 aa15□□□□□ -0.01
USE1-202ENST00000445667 KRIT1O00522 736 aa15□□□□□ -0.01
USE1-202ENST00000445667 VILLO15195 856 aa15□□□□□ -0.01
USE1-202ENST00000445667 PCDH8O95206 1070 aa15□□□□□ -0.01
USE1-202ENST00000445667 GSRP00390 522 aa15□□□□□ -0.01
USE1-202ENST00000445667 ERCC2P18074 760 aa15□□□□□ -0.01
USE1-202ENST00000445667 PCK1P35558 622 aa15□□□□□ -0.01
USE1-202ENST00000445667 CTSKP43235 329 aa15□□□□□ -0.01
USE1-202ENST00000445667 ADKP55263 362 aaKnown RBP15□□□□□ -0.01
USE1-202ENST00000445667 SNRPD1P62314 119 aaKnown RBP15□□□□□ -0.01
USE1-202ENST00000445667 CCDC15Q0P6D6 951 aa15□□□□□ -0.01
USE1-202ENST00000445667 TRIM14Q14142 442 aa15□□□□□ -0.01
USE1-202ENST00000445667 PIGHQ14442 188 aaPredicted RBP15□□□□□ -0.01
USE1-202ENST00000445667 CYTH1Q15438 398 aa15□□□□□ -0.01
USE1-202ENST00000445667 MYLK3Q32MK0 819 aa15□□□□□ -0.01
USE1-202ENST00000445667 TXNRD3NBQ6F5E7 133 aa15□□□□□ -0.01
USE1-202ENST00000445667 RFX8Q6ZV50 586 aa15□□□□□ -0.01
USE1-202ENST00000445667 TRIM69Q86WT6 500 aa15□□□□□ -0.01
USE1-202ENST00000445667 OR2AP1Q8NGE2 309 aa15□□□□□ -0.01
USE1-202ENST00000445667 HSPH1Q92598 858 aa15□□□□□ -0.01
USE1-202ENST00000445667 VOPP1Q96AW1 172 aa15□□□□□ -0.01
USE1-202ENST00000445667 PPP1R16AQ96I34 528 aa15□□□□□ -0.01
USE1-202ENST00000445667 EIF3CQ99613 913 aaKnown RBP15□□□□□ -0.01
USE1-202ENST00000445667 DNAJC7Q99615 494 aa15□□□□□ -0.01
USE1-202ENST00000445667 NCAPGQ9BPX3 1015 aa15□□□□□ -0.01
USE1-202ENST00000445667 PREBQ9HCU5 417 aa15□□□□□ -0.01
USE1-202ENST00000445667 CWC15Q9P013 229 aaKnown RBP15□□□□□ -0.01
USE1-202ENST00000445667 NENFQ9UMX5 172 aa15□□□□□ -0.01
USE1-202ENST00000445667 CA5BQ9Y2D0 317 aa15□□□□□ -0.01
USE1-202ENST00000445667 SPTBN2O15020 2390 aa14.99□□□□□ -0.01
USE1-202ENST00000445667 A0A1W2PQU0 124 aa14.99□□□□□ -0.01
USE1-202ENST00000445667 SLC31A1O15431 190 aa14.99□□□□□ -0.01
USE1-202ENST00000445667 POP4O95707 220 aaKnown RBP14.99□□□□□ -0.01
USE1-202ENST00000445667 ZNF883P0CG24 379 aa14.99□□□□□ -0.01
USE1-202ENST00000445667 RARAP10276 462 aa14.99□□□□□ -0.01
USE1-202ENST00000445667 ITGB7P26010 798 aa14.99□□□□□ -0.01
USE1-202ENST00000445667 PAPOLAP51003 745 aaKnown RBP14.99□□□□□ -0.01
USE1-202ENST00000445667 NEK3P51956 506 aa14.99□□□□□ -0.01
USE1-202ENST00000445667 NDST2P52849 883 aa14.99□□□□□ -0.01
USE1-202ENST00000445667 RHOAP61586 193 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms