RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 SLC36A3Q495N2 470 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 NCBP2-AS2Q69YL0 99 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 REP15Q6BDI9 236 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 FAM117BQ6P1L5 589 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 OLFML1Q6UWY5 402 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 CDAN1Q8IWY9 1227 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 HACE1Q8IYU2 909 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 SIX6OS1Q8N1H7 587 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 KDM1BQ8NB78 822 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 CANT1Q8WVQ1 401 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 FAM151AQ8WW52 585 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 MCMBPQ9BTE3 642 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 MRPL4Q9BYD3 311 aaKnown RBP10.17□□□□□ -0.78
CASP4-203ENST00000444739 TRPC7Q9HCX4 862 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 SPAG4Q9NPE6 437 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 RIC8BQ9NVN3 520 aa10.17□□□□□ -0.78
CASP4-203ENST00000444739 CLRN2A0PK11 232 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 TMEM233B4DJY2 109 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 CFAP99D6REC4 459 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 B4GALT4O60513 344 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 SEC24DO94855 1032 aaPredicted RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 PFKMP08237 780 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 KRT19P08727 400 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 VDRP11473 427 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 ZNF182P17025 639 aaPredicted RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 TFE3P19532 575 aaPredicted RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 PSMB4P28070 264 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 SDC4P31431 198 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 CNTNAP1P78357 1384 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 TNK2Q07912 1038 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 STX5Q13190 355 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 ZNF638Q14966 1978 aaKnown RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 DGKDQ16760 1214 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 SNRNP48Q6IEG0 339 aaKnown RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 KCTD8Q6ZWB6 473 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 CAMK1DQ8IU85 385 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 COLGALT2Q8IYK4 626 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 KHSRPQ92945 711 aaKnown RBP eCLIP10.16□□□□□ -0.78
CASP4-203ENST00000444739 CNDP2Q96KP4 475 aaKnown RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 SNX27Q96L92 541 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 CSPG4P5Q96PW8 444 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 LGMNQ99538 433 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 FTHL17Q9BXU8 183 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 TASP1Q9H6P5 420 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 VRTNQ9H8Y1 702 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 GIN1Q9NXP7 522 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 GGA3Q9NZ52 723 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 TMEM181Q9P2C4 612 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 SFMBT1Q9UHJ3 866 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 GTF2IRD1Q9UHL9 959 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 TCAF1Q9Y4C2 921 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 MAFBQ9Y5Q3 323 aaPredicted RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 ZCWPW2A0A1B0GU75 182 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 HACD1B0YJ81 288 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 RNF103O00237 685 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 CNOT3O75175 753 aaKnown RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 HDCP19113 662 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 ATP6V1B2P21281 511 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 GNA12Q03113 381 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 FSTL1Q12841 308 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 NME3Q13232 169 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 OLIG2Q13516 323 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 SAMD4BQ5PRF9 694 aaKnown RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 C8orf82Q6P1X6 216 aaPredicted RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 SLC2A7Q6PXP3 512 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 DPH6Q7L8W6 267 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 ZBTB46Q86UZ6 589 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 DHFR2Q86XF0 187 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 ZC3H7AQ8IWR0 971 aaKnown RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 PCYOX1LQ8NBM8 494 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.16□□□□□ -0.78
CASP4-203ENST00000444739 OR2T34Q8NGX1 318 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 OR2T3Q8NH03 318 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 CXorf38Q8TB03 319 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 STYXQ8WUJ0 223 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 C17orf50Q8WW18 174 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 CASP10Q92851 521 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 ZNF669Q96BR6 464 aaPredicted RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 HEXIM2Q96MH2 286 aaKnown RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 KCTD15Q96SI1 283 aaPredicted RBP10.16□□□□□ -0.78
CASP4-203ENST00000444739 DNAI2Q9GZS0 605 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 ADAMTS10Q9H324 1103 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 TMEM98Q9Y2Y6 226 aa10.16□□□□□ -0.78
CASP4-203ENST00000444739 KRBA1A5PL33 1030 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 TARM1B6A8C7 271 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 GOLGA8TH3BQL2 631 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 TIMM44O43615 452 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 OXSR1O95747 527 aaPredicted RBP10.15□□□□□ -0.78
CASP4-203ENST00000444739 CLIC3O95833 236 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 ETFBP38117 255 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 GRIA3P42263 894 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 RGS7P49802 495 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 TRAF2Q12933 501 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 ZBTB17Q13105 803 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 DGKZQ13574 1117 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 FRG1Q14331 258 aaKnown RBP10.15□□□□□ -0.78
CASP4-203ENST00000444739 MAP1SQ66K74 1059 aaPredicted RBP10.15□□□□□ -0.78
CASP4-203ENST00000444739 LRRC8EQ6NSJ5 796 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 GALNT18Q6P9A2 607 aa10.15□□□□□ -0.78
CASP4-203ENST00000444739 TMEM135Q86UB9 458 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms