RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 H2AFVQ71UI9 128 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 MINDY1Q8N5J2 469 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 TEKT4Q8WW24 435 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 CTNNBL1Q8WYA6 563 aaPredicted RBP18.97■□□□□ 0.63
CCDC188-202ENST00000444532 HMCESQ96FZ2 354 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 PPP1R16AQ96I34 528 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 ORAI3Q9BRQ5 295 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 LRRC19Q9H756 370 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 ZWILCHQ9H900 591 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 TM9SF3Q9HD45 589 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 UVRAGQ9P2Y5 699 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 HECAQ9UBI9 543 aaPredicted RBP18.97■□□□□ 0.63
CCDC188-202ENST00000444532 WASF2Q9Y6W5 498 aa18.97■□□□□ 0.63
CCDC188-202ENST00000444532 AKR1B15C9JRZ8 316 aaPredicted RBP18.96■□□□□ 0.63
CCDC188-202ENST00000444532 OPHN1O60890 802 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 GSRP00390 522 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 IL1R2P27930 398 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 NUDT1P36639 197 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 GRIA4P48058 902 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 CSNK1EP49674 416 aaKnown RBP18.96■□□□□ 0.63
CCDC188-202ENST00000444532 CCNHP51946 323 aaPredicted RBP18.96■□□□□ 0.63
CCDC188-202ENST00000444532 SNRPD1P62314 119 aaKnown RBP18.96■□□□□ 0.63
CCDC188-202ENST00000444532 RACK1P63244 317 aaKnown RBP18.96■□□□□ 0.63
CCDC188-202ENST00000444532 GRIK2Q13002 908 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 DPYSL2Q16555 572 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 IL27RAQ6UWB1 636 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 ZNF564Q8TBZ8 553 aaPredicted RBP18.96■□□□□ 0.63
CCDC188-202ENST00000444532 GRIN3AQ8TCU5 1115 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 LRIG1Q96JA1 1093 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 BTBD6Q96KE9 485 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 CCDC42Q96M95 316 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 CHP1Q99653 195 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 HDAC8Q9BY41 377 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 KLC2Q9H0B6 622 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 NHEJ1Q9H9Q4 299 aaPredicted RBP18.96■□□□□ 0.63
CCDC188-202ENST00000444532 PREBQ9HCU5 417 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 DNAAF2Q9NVR5 837 aaKnown RBP18.96■□□□□ 0.63
CCDC188-202ENST00000444532 CWC15Q9P013 229 aaKnown RBP18.96■□□□□ 0.63
CCDC188-202ENST00000444532 CTTNBP2NLQ9P2B4 639 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 LCMT1Q9UIC8 334 aa18.96■□□□□ 0.63
CCDC188-202ENST00000444532 PLXNA2O75051 1894 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 ARHGAP42A6NI28 874 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 UPK3BL1B0FP48 263 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 UPK3BL2E5RIL1 263 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 H3BRJ5 948 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 LATO43561 262 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 POP4O95707 220 aaKnown RBP18.95■□□□□ 0.62
CCDC188-202ENST00000444532 ERCC2P18074 760 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 ARL4AP40617 200 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 SLC14A1Q13336 389 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 PPM1JQ5JR12 505 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 KCNT1Q5JUK3 1230 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 PIP5KL1Q5T9C9 394 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 NEK5Q6P3R8 708 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 LEKR1Q6ZMV7 388 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 ERN2Q76MJ5 926 aaKnown RBP18.95■□□□□ 0.62
CCDC188-202ENST00000444532 PRPF39Q86UA1 669 aaKnown RBP18.95■□□□□ 0.62
CCDC188-202ENST00000444532 TRIM69Q86WT6 500 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 LZTR1Q8N653 840 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 OR2AP1Q8NGE2 309 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 ARRDC3Q96B67 414 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 TM6SF2Q9BZW4 377 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 SLCO1B1Q9Y6L6 691 aa18.95■□□□□ 0.62
CCDC188-202ENST00000444532 A0A1B0GVT2 93 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 TMCC1O94876 653 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 TMEM253P0C7T8 217 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 RARAP10276 462 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 TCF4P15884 667 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 CSRP1P21291 193 aaKnown RBP18.94■□□□□ 0.62
CCDC188-202ENST00000444532 ITGB7P26010 798 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 TAS2R38P59533 333 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 SLC25A11Q02978 314 aaKnown RBP18.94■□□□□ 0.62
CCDC188-202ENST00000444532 DPYSQ14117 519 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 HADHQ16836 314 aaKnown RBP18.94■□□□□ 0.62
CCDC188-202ENST00000444532 SMTNL2Q2TAL5 461 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 MYLK3Q32MK0 819 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 AFMIDQ63HM1 303 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 POLNQ7Z5Q5 900 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 RYBPQ8N488 228 aaPredicted RBP18.94■□□□□ 0.62
CCDC188-202ENST00000444532 HSPH1Q92598 858 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 PACSIN1Q9BY11 444 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 SLC39A8Q9C0K1 460 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 ZDHHC6Q9H6R6 413 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 EBF2Q9HAK2 575 aa18.94■□□□□ 0.62
CCDC188-202ENST00000444532 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.94■□□□□ 0.62
CCDC188-202ENST00000444532 DNAH14Q0VDD8 3507 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 RNF103O00237 685 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 PRAMEF11O60813 436 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 GJB3O75712 270 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 KCNK5O95279 499 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 CER1O95813 267 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 PAPOLAP51003 745 aaKnown RBP18.93■□□□□ 0.62
CCDC188-202ENST00000444532 PPP2CBP62714 309 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 PPP2CAP67775 309 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 BNC1Q01954 994 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 RAD51Q06609 339 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 ADAT2Q7Z6V5 191 aaKnown RBP18.93■□□□□ 0.62
CCDC188-202ENST00000444532 OR2I1PQ8NGU4 316 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 SKA1Q96BD8 255 aa18.93■□□□□ 0.62
CCDC188-202ENST00000444532 CELF6Q96J87 481 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms