RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 MX2P20592 715 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 CETN2P41208 172 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 DHPSP49366 369 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 RENBPP51606 427 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 CCNHP51946 323 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 RHOAP61586 193 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 TFDP2Q14188 446 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 GRM3Q14832 879 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 LPAL2Q16609 132 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 NCBP2-AS2Q69YL0 99 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 TIGD7Q6NT04 549 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 BZW1Q7L1Q6 419 aaKnown RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 RABEPKQ7Z6M1 372 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 KATNAL2Q8IYT4 538 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 RCOR2Q8IZ40 523 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 RYBPQ8N488 228 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 HDDC3Q8N4P3 179 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 NPWQ8N729 165 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 PCDH19Q8TAB3 1148 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 PIP4K2CQ8TBX8 421 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 RAPGEF5Q92565 580 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 RBM41Q96IZ5 413 aaKnown RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 GDAP1L1Q96MZ0 367 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 RNF157Q96PX1 679 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 OSBPL1AQ9BXW6 950 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 KDM4CQ9H3R0 1056 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 PDFQ9HBH1 243 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 ETNK2Q9NVF9 386 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 HECAQ9UBI9 543 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 IPO11Q9UI26 975 aaKnown RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 SALL4Q9UJQ4 1053 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 TPX2Q9ULW0 747 aaKnown RBP11.02□□□□□ -0.65
HDAC6-211ENST00000443563 HYOU1Q9Y4L1 999 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 ADGRG1Q9Y653 693 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 DUSP10Q9Y6W6 482 aa11.02□□□□□ -0.65
HDAC6-211ENST00000443563 RALGAPA1Q6GYQ0 2036 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 A0A1W2PP55 124 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 MACROD2A1Z1Q3 448 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 C3orf70A6NLC5 250 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-211ENST00000443563 KPNA3O00505 521 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-211ENST00000443563 APOL1O14791 398 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 ZNF821O75541 412 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-211ENST00000443563 SEMA4FO95754 770 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 CTNNA1P35221 906 aaKnown RBP11.01□□□□□ -0.65
HDAC6-211ENST00000443563 HOXD12P35452 270 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 COPS2P61201 443 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 ZNF33AQ06730 810 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 ARSIQ5FYB1 569 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 WDR45BQ5MNZ6 344 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 LYSMD4Q5XG99 296 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 LEKR1Q6ZMV7 388 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 DPY19L3Q6ZPD9 716 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 CYP2U1Q7Z449 544 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 FAM124AQ86V42 546 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 TMEFF1Q8IYR6 380 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 FRMD1Q8N878 549 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 EXD1Q8NHP7 514 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 RNF25Q96BH1 459 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-211ENST00000443563 ZNF419Q96HQ0 510 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-211ENST00000443563 CINPQ9BW66 212 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-211ENST00000443563 GPR174Q9BXC1 333 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 TM6SF2Q9BZW4 377 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 ZDHHC6Q9H6R6 413 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 SEPT3Q9UH03 358 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 AMFRQ9UKV5 643 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 MFHAS1Q9Y4C4 1052 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 SHROOM3Q8TF72 1996 aa11.01□□□□□ -0.65
HDAC6-211ENST00000443563 BCLAF3A2AJT9 711 aaKnown RBP11□□□□□ -0.65
HDAC6-211ENST00000443563 MEI4A8MW99 385 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 MIF4GDA9UHW6 222 aaKnown RBP11□□□□□ -0.65
HDAC6-211ENST00000443563 KRIT1O00522 736 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 MFSD11O43934 449 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 MAFKO60675 156 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 LEFTY1O75610 366 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 PTMAP06454 111 aaKnown RBP11□□□□□ -0.65
HDAC6-211ENST00000443563 CCNCP24863 283 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 CTNNA2P26232 953 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 ACSL1P33121 698 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 HSPA9P38646 679 aaKnown RBP11□□□□□ -0.65
HDAC6-211ENST00000443563 GARSP41250 739 aaKnown RBP11□□□□□ -0.65
HDAC6-211ENST00000443563 MAPK8P45983 427 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 CSNK1DP48730 415 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 NR2C2P49116 596 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 CCZ1BP86790 482 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 CCZ1P86791 482 aaPredicted RBP11□□□□□ -0.65
HDAC6-211ENST00000443563 CREB5Q02930 508 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 NSUN2Q08J23 767 aaKnown RBP eCLIP11□□□□□ -0.65
HDAC6-211ENST00000443563 GALNT2Q10471 571 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 ZNF235Q14590 738 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 GSE1Q14687 1217 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 LBRQ14739 615 aaKnown RBP11□□□□□ -0.65
HDAC6-211ENST00000443563 CYTH1Q15438 398 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 MYLK3Q32MK0 819 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 TFDP3Q5H9I0 405 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 MARC1Q5VT66 337 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 SLC9A4Q6AI14 798 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11□□□□□ -0.65
HDAC6-211ENST00000443563 ZNF662Q6ZS27 426 aa11□□□□□ -0.65
HDAC6-211ENST00000443563 PEX26Q7Z412 305 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms