RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RAD51Q06609 339 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 KIF5AQ12840 1032 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 CSRP2Q16527 193 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 IFI16Q16666 785 aaKnown RBP15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 ODF2Q5BJF6 829 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 SYCP2LQ5T4T6 812 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 NCBP2-AS2Q69YL0 99 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 CYP2U1Q7Z449 544 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 RABEPKQ7Z6M1 372 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 SLC41A1Q8IVJ1 513 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 LRRC8AQ8IWT6 810 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 HDDC3Q8N4P3 179 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 AADATQ8N5Z0 425 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 GANCQ8TET4 914 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 RAPGEF5Q92565 580 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 PPP1R16AQ96I34 528 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 GDAP1L1Q96MZ0 367 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 RNF157Q96PX1 679 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 GPR174Q9BXC1 333 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 NEUROG2Q9H2A3 272 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 ARRDC1-AS1Q9H2J1 176 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 KDM4CQ9H3R0 1056 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 HECAQ9UBI9 543 aaPredicted RBP15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 IPO11Q9UI26 975 aaKnown RBP15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 SALL4Q9UJQ4 1053 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 SARDHQ9UL12 918 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 MFHAS1Q9Y4C4 1052 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 WASF2Q9Y6W5 498 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 GPR179Q6PRD1 2367 aa15.29■□□□□ 0.04
CSNK1E-210ENST00000442216 LRRC72A6NJI9 287 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 C3orf70A6NLC5 250 aaPredicted RBP15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 NRDCO43847 1150 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 LEFTY1O75610 366 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 RNASEH2AO75792 299 aaKnown RBP15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 TGM1P22735 817 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 PTGER3P43115 390 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 CSNK1DP48730 415 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 DNA2P51530 1060 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 RHOAP61586 193 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 CREB5Q02930 508 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 GRM3Q14832 879 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 CYTH1Q15438 398 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 MYLK3Q32MK0 819 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 WDR45BQ5MNZ6 344 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 DAAM2Q86T65 1068 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 FAM124AQ86V42 546 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 SYT12Q8IV01 421 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 DCLK2Q8N568 766 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 CHST14Q8NCH0 376 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 DNASE2BQ8WZ79 361 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 HSPA12BQ96MM6 686 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 OSBPL1AQ9BXW6 950 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 CPEB1Q9BZB8 566 aaKnown RBP15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 TM6SF2Q9BZW4 377 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 VPS45Q9NRW7 570 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 SEMA4GQ9NTN9 838 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 KLHL11Q9NVR0 708 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 SERGEFQ9UGK8 458 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 PILRBQ9UKJ0 227 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 DUSP10Q9Y6W6 482 aa15.28■□□□□ 0.04
CSNK1E-210ENST00000442216 C10orf142B7Z368 130 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 MAFKO60675 156 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 PALMO75781 387 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 KRT1P04264 644 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 ZFXP17010 805 aaPredicted RBP15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 ITGB7P26010 798 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 RENBPP51606 427 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 NAP1L1P55209 391 aaKnown RBP15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 NSUN2Q08J23 767 aaKnown RBP eCLIP15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 SPEM2Q0P670 501 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 GALNT2Q10471 571 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 ARSIQ5FYB1 569 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 SLC9A4Q6AI14 798 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 LEKR1Q6ZMV7 388 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 KATNAL2Q8IYT4 538 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 ATPAF2Q8N5M1 289 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 PQLC3Q8N755 202 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 OR2T34Q8NGX1 318 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 CEP76Q8TAP6 659 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 KIAA1524Q8TCG1 905 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 UBE2Q2Q8WVN8 375 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 FATE1Q969F0 183 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 DESI2Q9BSY9 194 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 MAK16Q9BXY0 300 aaKnown RBP15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 HDAC8Q9BY41 377 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 TSGA10Q9BZW7 698 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 DYRK4Q9NR20 520 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 LHX3Q9UBR4 397 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 SUSD2Q9UGT4 822 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 EVLQ9UI08 416 aaPredicted RBP15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 HYOU1Q9Y4L1 999 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 ADGRG1Q9Y653 693 aa15.27■□□□□ 0.04
CSNK1E-210ENST00000442216 EP300Q09472 2414 aaPredicted RBP15.27■□□□□ 0.03
CSNK1E-210ENST00000442216 PTPRZ1P23471 2315 aaPredicted RBP15.27■□□□□ 0.03
CSNK1E-210ENST00000442216 DOCK9Q9BZ29 2069 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 TRPM6Q9BX84 2022 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 MEI4A8MW99 385 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 KPNA3O00505 521 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 PLRG1O43660 514 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms