RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 HMCESQ96FZ2 354 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 PRICKLE1Q96MT3 831 aaPredicted RBP8.23□□□□□ -1.09
CCDC39-201ENST00000442201 TTC25Q96NG3 672 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 CCT8L2Q96SF2 557 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 PRKD2Q9BZL6 878 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 EPB41L4BQ9H329 900 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 NINJ2Q9NZG7 142 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 CFAP97Q9P2B7 532 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 TMED5Q9Y3A6 229 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 CCDC195A0A1B0GUA6 201 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 A0A1B0GVM2 712 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 TYW5A2RUC4 315 aaKnown RBP8.23□□□□□ -1.09
CCDC39-201ENST00000442201 TCAF2A6NFQ2 919 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 H0YGN5 161 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 TRDMT1O14717 391 aaKnown RBP8.23□□□□□ -1.09
CCDC39-201ENST00000442201 ZBTB24O43167 697 aaPredicted RBP8.23□□□□□ -1.09
CCDC39-201ENST00000442201 TSPAN3O60637 253 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 POU2F2P09086 479 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 ZXDBP98169 803 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 OR2W6PQ8NHA6 318 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 ADAMTS19Q8TE59 1207 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 GDPD5Q8WTR4 605 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 TCEAL4Q96EI5 215 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 SERPINB12Q96P63 405 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 TASP1Q9H6P5 420 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 SP110Q9HB58 689 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 ARHGAP26Q9UNA1 814 aa8.23□□□□□ -1.09
CCDC39-201ENST00000442201 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 E7ESA3 106 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 F5H423 210 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 ZNF197O14709 1029 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 SCAMP3O14828 347 aaKnown RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 TMCC1O94876 653 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 GSTA1P08263 222 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 NRIP1P48552 1158 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 OXCT1P55809 520 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 ZNF177Q13360 481 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 TEAD2Q15562 447 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 DUSP6Q16828 381 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 FNBP1LQ5T0N5 605 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 C6orf118Q5T5N4 469 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 Q6ZNB5 142 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 HTR3DQ70Z44 454 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 CHST9Q7L1S5 443 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 GRASPQ7Z6J2 395 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 PDCD7Q8N8D1 485 aaKnown RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 UHMK1Q8TAS1 419 aaKnown RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 ZSCAN18Q8TBC5 510 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 USP33Q8TEY7 942 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 PYROXD1Q8WU10 500 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 IL12RB2Q99665 862 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 MAGEH1Q9H213 219 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 GBA3Q9H227 469 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 XAB2Q9HCS7 855 aaKnown RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 EIF2B3Q9NR50 452 aaKnown RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 ZMYM5Q9UJ78 669 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 NFS1Q9Y697 457 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 SOBPA7XYQ1 873 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 NRG2O14511 850 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 GREM1O60565 184 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 NFKB1P19838 968 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 RENBPP51606 427 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 PSMD7P51665 324 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 CBX3Q13185 183 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 HNRNPDQ14103 355 aaKnown RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 PRPSAP1Q14558 356 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 FASTKD3Q14CZ7 662 aaKnown RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 TTMPQ5BVD1 217 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 HP1BP3Q5SSJ5 553 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 NCCRP1Q6ZVX7 275 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 EXOC3L1Q86VI1 746 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 CMTM8Q8IZV2 173 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 TNS4Q8IZW8 715 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 CNTD1Q8N815 330 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 HJURPQ8NCD3 748 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 MAML1Q92585 1016 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 FATE1Q969F0 183 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 ZNF707Q96C28 371 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 TMA16Q96EY4 203 aaKnown RBP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 OCEL1Q9H607 264 aa8.22□□□□□ -1.09
CCDC39-201ENST00000442201 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 RBM22Q9NW64 420 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC39-201ENST00000442201 ERI2A8K979 691 aaKnown RBP8.21□□□□□ -1.09
CCDC39-201ENST00000442201 LEFTY2O00292 366 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 ATP9BO43861 1147 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 MOSPD3O75425 235 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 CCND1P24385 295 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 CD68P34810 354 aaPredicted RBP8.21□□□□□ -1.09
CCDC39-201ENST00000442201 NTHL1P78549 312 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 GNA12Q03113 381 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 SULT2A1Q06520 285 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 IL10RBQ08334 325 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 ZNF844Q08AG5 666 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 MTM1Q13496 603 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 SERINC3Q13530 473 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 MSS51Q4VC12 460 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 CROCCP2Q86T23 111 aa8.21□□□□□ -1.09
CCDC39-201ENST00000442201 SETD3Q86TU7 594 aaPredicted RBP8.21□□□□□ -1.09
CCDC39-201ENST00000442201 SMG7Q92540 1137 aaKnown RBP8.21□□□□□ -1.09
CCDC39-201ENST00000442201 PABPC5Q96DU9 382 aaKnown RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms