RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 KCTD8Q6ZWB6 473 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 ARFGAP1Q8N6T3 406 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 AFG1LQ8WV93 481 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 RNF19AQ9NV58 838 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 SMOXQ9NWM0 555 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 ERVK-11Q9UQG0 969 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 FAM159BA6NKW6 160 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 H0YJX3 145 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 SNAP91O60641 907 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 CALB1P05937 261 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 CCNA2P20248 432 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 SLC25A11Q02978 314 aaKnown RBP17.03■□□□□ 0.32
PMS1-213ENST00000441310 RALGDSQ12967 914 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 LSM12Q3MHD2 195 aaKnown RBP17.03■□□□□ 0.32
PMS1-213ENST00000441310 FAM47CQ5HY64 1035 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 HMBOX1Q6NT76 420 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 NAPRTQ6XQN6 538 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 CHSY3Q70JA7 882 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 JOSD2Q8TAC2 188 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 SFMBT1Q9UHJ3 866 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 AKT3Q9Y243 479 aa17.03■□□□□ 0.32
PMS1-213ENST00000441310 A0A087WZ62 844 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 F5H423 210 aaPredicted RBP17.02■□□□□ 0.32
PMS1-213ENST00000441310 AKAP10O43572 662 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 MYO1DO94832 1006 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 CD19P15391 556 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 MXD4Q14582 209 aaPredicted RBP17.02■□□□□ 0.32
PMS1-213ENST00000441310 OXA1LQ15070 435 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 ZPBP2Q6X784 338 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 TTC30AQ86WT1 665 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 OFCC1Q8IZS5 231 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 FAM110BQ8TC76 370 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 TFAP2CQ92754 450 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 ALPK1Q96QP1 1244 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 CTRCQ99895 268 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 FDXACB1Q9BRP7 624 aaPredicted RBP17.02■□□□□ 0.32
PMS1-213ENST00000441310 SLC27A5Q9Y2P5 690 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.02■□□□□ 0.32
PMS1-213ENST00000441310 TMEM114B3SHH9 223 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 PSMD11O00231 422 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 PRKCGP05129 697 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 KRT7P08729 469 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 NKX2-5P52952 324 aaPredicted RBP17.02■□□□□ 0.32
PMS1-213ENST00000441310 MCCD1P59942 119 aaPredicted RBP17.02■□□□□ 0.32
PMS1-213ENST00000441310 GALNT2Q10471 571 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 CARTPTQ16568 116 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 HADHQ16836 314 aaKnown RBP17.02■□□□□ 0.32
PMS1-213ENST00000441310 DUOXA2Q1HG44 320 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 CASC4Q6P4E1 433 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 KIAA0319LQ8IZA0 1049 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 CAPSLQ8WWF8 208 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 CYGBQ8WWM9 190 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 DOK1Q99704 481 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 OSBPL10Q9BXB5 764 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 SMARCAD1Q9H4L7 1026 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 EFCAB1Q9HAE3 211 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 XPNPEP3Q9NQH7 507 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 CISHQ9NSE2 258 aa17.02■□□□□ 0.32
PMS1-213ENST00000441310 A0A1W2PQ67 120 aa17.02■□□□□ 0.31
PMS1-213ENST00000441310 ANKRD34BA5PLL1 514 aa17.02■□□□□ 0.31
PMS1-213ENST00000441310 TRIM38O00635 465 aa17.02■□□□□ 0.31
PMS1-213ENST00000441310 MPSTP25325 297 aa17.02■□□□□ 0.31
PMS1-213ENST00000441310 IDUAP35475 653 aa17.02■□□□□ 0.31
PMS1-213ENST00000441310 ADAM17P78536 824 aa17.02■□□□□ 0.31
PMS1-213ENST00000441310 DNASE1L3Q13609 305 aa17.02■□□□□ 0.31
PMS1-213ENST00000441310 PTCD2Q8WV60 388 aaKnown RBP17.02■□□□□ 0.31
PMS1-213ENST00000441310 FRMD8P1Q9BZ68 369 aaPredicted RBP17.02■□□□□ 0.31
PMS1-213ENST00000441310 TJP2Q9UDY2 1190 aa17.02■□□□□ 0.31
PMS1-213ENST00000441310 VPS28Q9UK41 221 aa17.02■□□□□ 0.31
PMS1-213ENST00000441310 PCDHB12Q9Y5F1 795 aa17.02■□□□□ 0.31
PMS1-213ENST00000441310 PDHXO00330 501 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 MZF1P28698 734 aaPredicted RBP17.01■□□□□ 0.31
PMS1-213ENST00000441310 GRIA1P42261 906 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 CSE1LP55060 971 aaKnown RBP17.01■□□□□ 0.31
PMS1-213ENST00000441310 CRADDP78560 199 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 UTS2BQ765I0 119 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 SLCO4A1Q96BD0 722 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 ATXN7L3BQ96GX2 97 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 C1orf50Q9BV19 199 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 UNKQ9C0B0 810 aaKnown RBP17.01■□□□□ 0.31
PMS1-213ENST00000441310 KLHL3Q9UH77 587 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 CNOT6Q9ULM6 557 aaKnown RBP17.01■□□□□ 0.31
PMS1-213ENST00000441310 SLC30A1Q9Y6M5 507 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 DICER1Q9UPY3 1922 aaKnown RBP17.01■□□□□ 0.31
PMS1-213ENST00000441310 DYTNA2CJ06 578 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 GPR25O00155 361 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 ASS1P00966 412 aaKnown RBP17.01■□□□□ 0.31
PMS1-213ENST00000441310 CCR10P46092 362 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 TSPY1Q01534 308 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 MAMDC4Q6UXC1 1216 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 USP50Q70EL3 339 aaPredicted RBP17.01■□□□□ 0.31
PMS1-213ENST00000441310 TNIP2Q8NFZ5 429 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 TFAP2BQ92481 460 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 LPGAT1Q92604 370 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 FBXL20Q96IG2 436 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 MROH8Q9H579 483 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 PARVBQ9HBI1 364 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 PIH1D1Q9NWS0 290 aaKnown RBP17.01■□□□□ 0.31
PMS1-213ENST00000441310 DCDC2Q9UHG0 476 aa17.01■□□□□ 0.31
PMS1-213ENST00000441310 ATP11BQ9Y2G3 1177 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms