RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 KRT81Q14533 505 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 HADHQ16836 314 aaKnown RBP18.02■□□□□ 0.48
CCDC188-201ENST00000439765 LYSMD4Q5XG99 296 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 C11orf63Q6NUN7 778 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 DAAM2Q86T65 1068 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 METTL3Q86U44 580 aaKnown RBP18.02■□□□□ 0.48
CCDC188-201ENST00000439765 SYCE1Q8N0S2 351 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 OR8D1Q8WZ84 308 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 TOE1Q96GM8 510 aaKnown RBP18.02■□□□□ 0.48
CCDC188-201ENST00000439765 ALS2CR12Q96Q35 445 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 KLC2Q9H0B6 622 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 TMEM74BQ9NUR3 256 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 SERGEFQ9UGK8 458 aa18.02■□□□□ 0.48
CCDC188-201ENST00000439765 ATXN2Q99700 1313 aaKnown RBP18.02■□□□□ 0.47
CCDC188-201ENST00000439765 ESPNB1AK53 854 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 NDUFS2O75306 463 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 SLC1A1P43005 524 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 CDH6P55285 790 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 IRX4P78413 519 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 ZBTB16Q05516 673 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 POM121L1PQ3SYA9 428 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 PARP15Q460N3 678 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 TRIM61Q5EBN2 209 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 ZNF569Q5MCW4 686 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 ZFYVE27Q5T4F4 411 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 POLNQ7Z5Q5 900 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 UMODL1-AS1Q8N2C9 162 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 GANCQ8TET4 914 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 HSPA12BQ96MM6 686 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 CSPG4P5Q96PW8 444 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 FAM129BQ96TA1 746 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 GPR174Q9BXC1 333 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 TM6SF2Q9BZW4 377 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 PABPC3Q9H361 631 aaKnown RBP18.01■□□□□ 0.47
CCDC188-201ENST00000439765 GOLPH3Q9H4A6 298 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 PCDH18Q9HCL0 1135 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 TMEM9BQ9NQ34 198 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 PILRBQ9UKJ0 227 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 MFHAS1Q9Y4C4 1052 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 KMT2BQ9UMN6 2715 aaPredicted RBP18.01■□□□□ 0.47
CCDC188-201ENST00000439765 PLXNA2O75051 1894 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 TP53BP1Q12888 1972 aaPredicted RBP18.01■□□□□ 0.47
CCDC188-201ENST00000439765 A0A1W2PP55 124 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 C4orf47A7E2U8 309 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 CDX4O14627 284 aaPredicted RBP18.01■□□□□ 0.47
CCDC188-201ENST00000439765 KCNK5O95279 499 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 CD160O95971 181 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 IGLV3-19P01714 112 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 CD48P09326 243 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 SLC8A1P32418 973 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 DNA2P51530 1060 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 ZNF135P52742 658 aaPredicted RBP18.01■□□□□ 0.47
CCDC188-201ENST00000439765 METAP1P53582 386 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 YBEYP58557 167 aaPredicted RBP18.01■□□□□ 0.47
CCDC188-201ENST00000439765 MMRN1Q13201 1228 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 ATP13A4Q4VNC1 1196 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 SLC23A3Q6PIS1 610 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 NYAP1Q6ZVC0 841 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 GRIN3AQ8TCU5 1115 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 CCDC114Q96M63 670 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 LRRC19Q9H756 370 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 FBXL12Q9NXK8 326 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 DONSONQ9NYP3 566 aa18.01■□□□□ 0.47
CCDC188-201ENST00000439765 WSB2Q9NYS7 404 aaPredicted RBP18.01■□□□□ 0.47
CCDC188-201ENST00000439765 DFFAO00273 331 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 KDELR3O43731 214 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 ZNF821O75541 412 aaPredicted RBP18■□□□□ 0.47
CCDC188-201ENST00000439765 RNASEH2AO75792 299 aaKnown RBP18■□□□□ 0.47
CCDC188-201ENST00000439765 COMTP21964 271 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 AMPD1P23109 780 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 ITPKAP23677 461 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 ACSL1P33121 698 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 NDST2P52849 883 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 GEMIN4P57678 1058 aaKnown RBP18■□□□□ 0.47
CCDC188-201ENST00000439765 GNG11P61952 73 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 ZNF33AQ06730 810 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 SERINC3Q13530 473 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 DSG4Q86SJ6 1040 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 SLC41A1Q8IVJ1 513 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 SLC35F6Q8N357 371 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 AADATQ8N5Z0 425 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 CHST14Q8NCH0 376 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 OR2A12Q8NGT7 310 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 NUSAP1Q9BXS6 441 aaKnown RBP18■□□□□ 0.47
CCDC188-201ENST00000439765 CALN1Q9BXU9 219 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 CEP44Q9C0F1 390 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 SLC39A8Q9C0K1 460 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 ETNK2Q9NVF9 386 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 SARDHQ9UL12 918 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 HYOU1Q9Y4L1 999 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 USP24Q9UPU5 2620 aa18■□□□□ 0.47
CCDC188-201ENST00000439765 ZSCAN5CA6NGD5 496 aaPredicted RBP17.99■□□□□ 0.47
CCDC188-201ENST00000439765 PLK4O00444 970 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 MCF2LO15068 1137 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 ALOX15BO15296 676 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 TMCC1O94876 653 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 ADH1BP00325 375 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 CTSLP07711 333 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 KRT7P08729 469 aa17.99■□□□□ 0.47
CCDC188-201ENST00000439765 C7P10643 843 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms