RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 C3orf70A6NLC5 250 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-206ENST00000439717 METTL12A8MUP2 240 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 FOXD2O60548 495 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-206ENST00000439717 POP4O95707 220 aaKnown RBP12.01□□□□□ -0.49
HSPG2-206ENST00000439717 SEMA4FO95754 770 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 IGSF6O95976 241 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 CTSLP07711 333 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 ZFXP17010 805 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-206ENST00000439717 ACSL1P33121 698 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 HOXD12P35452 270 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 DRD3P35462 400 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 PTGER3P43115 390 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 RHOAP61586 193 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 RAD51Q06609 339 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 ZNF33AQ06730 810 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 CYTH1Q15438 398 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 MYLK3Q32MK0 819 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 ARSIQ5FYB1 569 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 PLA2G2CQ5R387 149 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 SYCP2LQ5T4T6 812 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 NCBP2-AS2Q69YL0 99 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 CYP2U1Q7Z449 544 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 FAM124AQ86V42 546 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 KATNAL2Q8IYT4 538 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 ATPAF2Q8N5M1 289 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 PQLC3Q8N755 202 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 KIAA1524Q8TCG1 905 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 ANP32BQ92688 251 aaKnown RBP12.01□□□□□ -0.49
HSPG2-206ENST00000439717 GDAP1L1Q96MZ0 367 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 OSBPL1AQ9BXW6 950 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 HDAC8Q9BY41 377 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 TM6SF2Q9BZW4 377 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 NEUROG2Q9H2A3 272 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 ARRDC1-AS1Q9H2J1 176 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 KDM4CQ9H3R0 1056 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 DYRK4Q9NR20 520 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 VPS45Q9NRW7 570 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 SERGEFQ9UGK8 458 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 TPX2Q9ULW0 747 aaKnown RBP12.01□□□□□ -0.49
HSPG2-206ENST00000439717 ADGRG1Q9Y653 693 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 WASF2Q9Y6W5 498 aa12.01□□□□□ -0.49
HSPG2-206ENST00000439717 NYNRINQ9P2P1 1898 aaKnown RBP12.01□□□□□ -0.49
HSPG2-206ENST00000439717 LRRC72A6NJI9 287 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 KPNA3O00505 521 aaPredicted RBP12□□□□□ -0.49
HSPG2-206ENST00000439717 MFSD11O43934 449 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 MAFKO60675 156 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 LEFTY1O75610 366 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 PALMO75781 387 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 ZRANB2O95218 330 aaKnown RBP eCLIP12□□□□□ -0.49
HSPG2-206ENST00000439717 TNNT1P13805 278 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 MX2P20592 715 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 MPLP40238 635 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 CSNK1DP48730 415 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 CREB5Q02930 508 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 NSUN2Q08J23 767 aaKnown RBP eCLIP12□□□□□ -0.49
HSPG2-206ENST00000439717 GALNT2Q10471 571 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 GRM3Q14832 879 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 CSRP2Q16527 193 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 TAZQ16635 292 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 WDR45BQ5MNZ6 344 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 PEAR1Q5VY43 1037 aaPredicted RBP12□□□□□ -0.49
HSPG2-206ENST00000439717 SLC9A4Q6AI14 798 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12□□□□□ -0.49
HSPG2-206ENST00000439717 ARHGAP36Q6ZRI8 547 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 SYT12Q8IV01 421 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 SLC41A1Q8IVJ1 513 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 TP53INP2Q8IXH6 220 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 RCOR2Q8IZ40 523 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 SYCE1Q8N0S2 351 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 RYBPQ8N488 228 aaPredicted RBP12□□□□□ -0.49
HSPG2-206ENST00000439717 DCLK2Q8N568 766 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 RNF10Q8N5U6 811 aaKnown RBP12□□□□□ -0.49
HSPG2-206ENST00000439717 DEFB119Q8N690 84 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 NETO2Q8NC67 525 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 OR2T34Q8NGX1 318 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 EXD1Q8NHP7 514 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 GRIN3AQ8TCU5 1115 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 TRAF3IP1Q8TDR0 691 aaPredicted RBP12□□□□□ -0.49
HSPG2-206ENST00000439717 NSMCE1Q8WV22 266 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 UBE2Q2Q8WVN8 375 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 DNASE2BQ8WZ79 361 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 FATE1Q969F0 183 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 RNF25Q96BH1 459 aaPredicted RBP12□□□□□ -0.49
HSPG2-206ENST00000439717 HSPA12BQ96MM6 686 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 CINPQ9BW66 212 aaPredicted RBP12□□□□□ -0.49
HSPG2-206ENST00000439717 GOLPH3Q9H4A6 298 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 LHX3Q9UBR4 397 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 SEPT3Q9UH03 358 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 PILRBQ9UKJ0 227 aa12□□□□□ -0.49
HSPG2-206ENST00000439717 ZFHX2Q9C0A1 2572 aaPredicted RBP11.99□□□□□ -0.49
HSPG2-206ENST00000439717 FRYLO94915 3013 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 MACROD2A1Z1Q3 448 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 CCDC66A2RUB6 948 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 GRID2IPA4D2P6 1211 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 MEI4A8MW99 385 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 KRIT1O00522 736 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 APOL1O14791 398 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 KRT86O43790 486 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 PEX11BO96011 259 aa11.99□□□□□ -0.49
HSPG2-206ENST00000439717 ZNF806P0C7X5 589 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms