RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 KIAA1161Q6NSJ0 714 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 TMPRSS7Q7RTY8 843 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 NLRP14Q86W24 1093 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 ARHGEF2Q92974 986 aaKnown RBP19.16■□□□□ 0.66
CCDC78-204ENST00000439619 VCPIP1Q96JH7 1222 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 FEM1CQ96JP0 617 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 CNDP2Q96KP4 475 aaKnown RBP19.16■□□□□ 0.66
CCDC78-204ENST00000439619 ZDHHC6Q9H6R6 413 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 CATSPERBQ9H7T0 1116 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 TOR4AQ9NXH8 423 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 FCF1Q9Y324 198 aaKnown RBP19.16■□□□□ 0.66
CCDC78-204ENST00000439619 MAP1BP46821 2468 aaKnown RBP19.16■□□□□ 0.66
CCDC78-204ENST00000439619 NUMA1Q14980 2115 aa19.16■□□□□ 0.66
CCDC78-204ENST00000439619 FAM72CH0Y354 149 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 ENC1O14682 589 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 DKK1O94907 266 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 C1SP09871 688 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 ACVRL1P37023 503 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 RPS21P63220 83 aaKnown RBP19.15■□□□□ 0.66
CCDC78-204ENST00000439619 RAD51Q06609 339 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 RAB6CQ53S08 254 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 FAM72AQ5TYM5 149 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 FAM72DQ6L9T8 149 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 APTXQ7Z2E3 356 aaKnown RBP19.15■□□□□ 0.66
CCDC78-204ENST00000439619 FAM72BQ86X60 149 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 EID2Q8N6I1 236 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 CASKIN2Q8WXE0 1202 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 RAB7BQ96AH8 199 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 ARHGEF26Q96DR7 871 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 OSBPL1AQ9BXW6 950 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 TM6SF2Q9BZW4 377 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 RAB6CQ9H0N0 254 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 PARVAQ9NVD7 372 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 TMEM63CQ9P1W3 806 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 PCDHGA1Q9Y5H4 931 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 WASF2Q9Y6W5 498 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 CACNA1BQ00975 2339 aa19.15■□□□□ 0.66
CCDC78-204ENST00000439619 USP24Q9UPU5 2620 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 PCNX2A6NKB5 2137 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 NEMP1O14524 444 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 CCP110O43303 1012 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 BUB1O43683 1085 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 KDELR3O43731 214 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 ZNF821O75541 412 aaPredicted RBP19.14■□□□□ 0.65
CCDC78-204ENST00000439619 POP4O95707 220 aaKnown RBP19.14■□□□□ 0.65
CCDC78-204ENST00000439619 GSRP00390 522 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 THEGLP0DJG4 465 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 ADRB3P13945 408 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 PRLRP16471 622 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 ZNF165P49910 485 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 YBEYP58557 167 aaPredicted RBP19.14■□□□□ 0.65
CCDC78-204ENST00000439619 TPM4P67936 248 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 SGCGQ13326 291 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 ASIC2Q16515 512 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 ZNF284Q2VY69 593 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 ARTNQ5T4W7 220 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 MCOLN2Q8IZK6 566 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 RTL3Q8N8U3 475 aaKnown RBP19.14■□□□□ 0.65
CCDC78-204ENST00000439619 TMEM145Q8NBT3 493 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 OR2AP1Q8NGE2 309 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 MYOCQ99972 504 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 HSD3B7Q9H2F3 369 aa19.14■□□□□ 0.65
CCDC78-204ENST00000439619 CCDC86Q9H6F5 360 aaKnown RBP19.14■□□□□ 0.65
CCDC78-204ENST00000439619 RTN4Q9NQC3 1192 aaKnown RBP19.14■□□□□ 0.65
CCDC78-204ENST00000439619 KRIT1O00522 736 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 FGF10O15520 208 aaPredicted RBP19.13■□□□□ 0.65
CCDC78-204ENST00000439619 AP1G1O43747 822 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 CREB3O43889 395 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 HTR7P34969 479 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 HNF1BP35680 557 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
CCDC78-204ENST00000439619 SHBQ15464 509 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 PARP15Q460N3 678 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 CAVIN1Q6NZI2 390 aaKnown RBP19.13■□□□□ 0.65
CCDC78-204ENST00000439619 IRF2BP2Q7Z5L9 587 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 SPATS2Q86XZ4 545 aaKnown RBP19.13■□□□□ 0.65
CCDC78-204ENST00000439619 DCP2Q8IU60 420 aaKnown RBP19.13■□□□□ 0.65
CCDC78-204ENST00000439619 KLK6Q92876 244 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 GDAP1L1Q96MZ0 367 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 CALN1Q9BXU9 219 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 NDFIP2Q9NV92 336 aa19.13■□□□□ 0.65
CCDC78-204ENST00000439619 A0A1W2PQC6 194 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 SRRM3A6NNA2 597 aaPredicted RBP19.12■□□□□ 0.65
CCDC78-204ENST00000439619 A6NNZ2 444 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 EIF3CLB5ME19 914 aaKnown RBP19.12■□□□□ 0.65
CCDC78-204ENST00000439619 TEX33O43247 280 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 TSPAN6O43657 245 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 RFPL3O75679 317 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 SERPINC1P01008 464 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 RPL7AP62424 266 aaKnown RBP19.12■□□□□ 0.65
CCDC78-204ENST00000439619 BNIP3Q12983 259 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 ZNF805Q5CZA5 627 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 SFMBT2Q5VUG0 894 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 TMC6Q7Z403 805 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 TMPRSS12Q86WS5 348 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 EIF3CQ99613 913 aaKnown RBP19.12■□□□□ 0.65
CCDC78-204ENST00000439619 SLC17A9Q9BYT1 436 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 KLHL11Q9NVR0 708 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 FZD10Q9ULW2 581 aa19.12■□□□□ 0.65
CCDC78-204ENST00000439619 FADS3Q9Y5Q0 445 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms