RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 SNX31Q8N9S9 440 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 FAM156AQ8NDB6 213 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 SGIP1Q9BQI5 828 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 CENPKQ9BS16 269 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 TRPV6Q9H1D0 765 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 MIOSQ9NXC5 875 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 RGSL1A5PLK6 1076 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 RNASEH1O60930 286 aaKnown RBP16.97■□□□□ 0.31
TTC3-209ENST00000438055 GALNT2Q10471 571 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 TIGD5Q53EQ6 642 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 LDLRAD1Q5T700 205 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 DSELQ8IZU8 1212 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 C3orf58Q8NDZ4 430 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 NR1H4Q96RI1 486 aaPredicted RBP16.97■□□□□ 0.31
TTC3-209ENST00000438055 RTKNQ9BST9 563 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 BRD8Q9H0E9 1235 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 COPS7BQ9H9Q2 264 aaPredicted RBP16.97■□□□□ 0.31
TTC3-209ENST00000438055 NSMCE4AQ9NXX6 385 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 CCL22O00626 93 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 CABYRO75952 493 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 TSPAN8P19075 237 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 DLG1Q12959 904 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 LRRC8EQ6NSJ5 796 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 CXCL17Q6UXB2 119 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 RPS27LQ71UM5 84 aaKnown RBP16.97■□□□□ 0.31
TTC3-209ENST00000438055 PTAR1Q7Z6K3 402 aaPredicted RBP16.97■□□□□ 0.31
TTC3-209ENST00000438055 PCDH20Q8N6Y1 951 aaKnown RBP16.97■□□□□ 0.31
TTC3-209ENST00000438055 ZSCAN18Q8TBC5 510 aaPredicted RBP16.97■□□□□ 0.31
TTC3-209ENST00000438055 NPAS2Q99743 824 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 POMKQ9H5K3 350 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 AK5Q9Y6K8 562 aa16.97■□□□□ 0.31
TTC3-209ENST00000438055 SF3B1O75533 1304 aaKnown RBP eCLIP16.97■□□□□ 0.313e-7■■■■■ 46.9
TTC3-209ENST00000438055 MBLAC1A4D2B0 266 aaPredicted RBP16.96■□□□□ 0.31
TTC3-209ENST00000438055 ETS2P15036 469 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 RPL34P49207 117 aaKnown RBP16.96■□□□□ 0.31
TTC3-209ENST00000438055 MAXP61244 160 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 FSCN1Q16658 493 aaKnown RBP16.96■□□□□ 0.31
TTC3-209ENST00000438055 OR52E8Q6IFG1 317 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 PKN3Q6P5Z2 889 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 ZYG11AQ6WRX3 759 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 ZC3H15Q8WU90 426 aaKnown RBP16.96■□□□□ 0.31
TTC3-209ENST00000438055 GATA6Q92908 595 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 CDH9Q9ULB4 789 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 H2AFYO75367 372 aaKnown RBP16.96■□□□□ 0.31
TTC3-209ENST00000438055 RAB10P61026 200 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 SDHAF4Q5VUM1 108 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 TMEM86AQ8N2M4 240 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 ZNF483Q8TF39 744 aaPredicted RBP16.96■□□□□ 0.31
TTC3-209ENST00000438055 WDR41Q9HAD4 459 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 GTF2IRD1Q9UHL9 959 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 PAGE1O75459 146 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 ODC1P11926 461 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 CRABP2P29373 138 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 PPARGP37231 505 aaPredicted RBP16.96■□□□□ 0.31
TTC3-209ENST00000438055 ALDH1A3P47895 512 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 CD151P48509 253 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 THOP1P52888 689 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 TAS2R39P59534 338 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 ITGA7Q13683 1181 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 BHLHE22Q8NFJ8 381 aaPredicted RBP16.96■□□□□ 0.31
TTC3-209ENST00000438055 FCRL2Q96LA5 508 aaPredicted RBP16.96■□□□□ 0.31
TTC3-209ENST00000438055 DMAP1Q9NPF5 467 aaPredicted RBP16.96■□□□□ 0.31
TTC3-209ENST00000438055 NCKIPSDQ9NZQ3 722 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 BCAP29Q9UHQ4 241 aa16.96■□□□□ 0.31
TTC3-209ENST00000438055 ARL5CA6NH57 179 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 MATN2O00339 956 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 ZNF195O14628 629 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 DLX3O60479 287 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 PGM3O95394 542 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 VCLP18206 1134 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 ETFBP38117 255 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 AIF1P55008 147 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 TSPY1Q01534 308 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 GRIK3Q13003 919 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 FAM110CQ1W6H9 321 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 MAP7D1Q3KQU3 841 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 RARS2Q5T160 578 aaKnown RBP16.95■□□□□ 0.3
TTC3-209ENST00000438055 DCLRE1AQ6PJP8 1040 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 PPP1R10Q96QC0 940 aaKnown RBP16.95■□□□□ 0.3
TTC3-209ENST00000438055 GPR22Q99680 433 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 GORASP1Q9BQQ3 440 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 KATNAL1Q9BW62 490 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 EFCAB1Q9HAE3 211 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 GLOD4Q9HC38 313 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 NT5MQ9NPB1 228 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 NOD1Q9Y239 953 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 PTPRFP10586 1907 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 JUNP05412 331 aaKnown RBP16.95■□□□□ 0.3
TTC3-209ENST00000438055 XRCC1P18887 633 aaPredicted RBP16.95■□□□□ 0.3
TTC3-209ENST00000438055 LRPAP1P30533 357 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 NEPROQ6NW34 567 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 LDB1Q86U70 411 aaPredicted RBP16.95■□□□□ 0.3
TTC3-209ENST00000438055 SPATA2LQ8IUW3 424 aaPredicted RBP16.95■□□□□ 0.3
TTC3-209ENST00000438055 AFAP1L2Q8N4X5 818 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 MS4A4AQ96JQ5 239 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 DRC3Q9H069 523 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 CATSPERBQ9H7T0 1116 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 ABI2Q9NYB9 513 aaPredicted RBP16.95■□□□□ 0.3
TTC3-209ENST00000438055 RRN3Q9NYV6 651 aa16.95■□□□□ 0.3
TTC3-209ENST00000438055 AP3B1O00203 1094 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms