RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 TXNRD3NBQ6F5E7 133 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 ERMP1Q7Z2K6 904 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 DGLUCYQ7Z3D6 616 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 POLNQ7Z5Q5 900 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 ZNF354CQ86Y25 554 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 LZTR1Q8N653 840 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 OR2AP1Q8NGE2 309 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 FAM71BQ8TC56 605 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 SNX19Q92543 992 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 HSPH1Q92598 858 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 LRIG1Q96JA1 1093 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 HDAC8Q9BY41 377 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 ZDHHC5Q9C0B5 715 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 SLC39A8Q9C0K1 460 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.13■□□□□ 0.49
NCSTN-208ENST00000438008 SPTLC3Q9NUV7 552 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 HECAQ9UBI9 543 aaPredicted RBP18.13■□□□□ 0.49
NCSTN-208ENST00000438008 INTUQ9ULD6 942 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 NUMA1Q14980 2115 aa18.13■□□□□ 0.49
NCSTN-208ENST00000438008 NYNRINQ9P2P1 1898 aaKnown RBP18.12■□□□□ 0.49
NCSTN-208ENST00000438008 A0A1W2PPC4 97 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 ARHGAP42A6NI28 874 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 RNF103O00237 685 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 PLK4O00444 970 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 KPNA3O00505 521 aaPredicted RBP18.12■□□□□ 0.49
NCSTN-208ENST00000438008 LEFTY1O75610 366 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 ARL4AP40617 200 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 DNA2P51530 1060 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 SNRPD1P62314 119 aaKnown RBP18.12■□□□□ 0.49
NCSTN-208ENST00000438008 HADHQ16836 314 aaKnown RBP18.12■□□□□ 0.49
NCSTN-208ENST00000438008 POM121L1PQ3SYA9 428 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 PIP5KL1Q5T9C9 394 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 LEKR1Q6ZMV7 388 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 ARHGAP12Q8IWW6 846 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 GRIN3AQ8TCU5 1115 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 TSC1Q92574 1164 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 ARRDC3Q96B67 414 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 PPP1R16AQ96I34 528 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 CELF6Q96J87 481 aaKnown RBP18.12■□□□□ 0.49
NCSTN-208ENST00000438008 TM6SF2Q9BZW4 377 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 PDFQ9HBH1 243 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 PCDH18Q9HCL0 1135 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 FSCN3Q9NQT6 498 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 SLCO1B1Q9Y6L6 691 aa18.12■□□□□ 0.49
NCSTN-208ENST00000438008 DCHS1Q96JQ0 3298 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TBC1D3DA0A087WVF3 549 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TBC1D3IA0A087WXS9 549 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TBC1D3EA0A087X179 549 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TBC1D3KA0A087X1G2 549 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 DCDC2BA2VCK2 349 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TBC1D3FA6NER0 549 aaPredicted RBP18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TBC1D3LB9A6J9 549 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 LATO43561 262 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 PRAMEF11O60813 436 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 MTA2O94776 668 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TMCC1O94876 653 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 POP4O95707 220 aaKnown RBP18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TBC1D3HP0C7X1 549 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 MAN1A1P33908 653 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 PAPOLAP51003 745 aaKnown RBP18.11■□□□□ 0.49
NCSTN-208ENST00000438008 AFF3P51826 1226 aaKnown RBP18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TAS2R38P59533 333 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TCEAL1Q15170 157 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 MYLK3Q32MK0 819 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TBC1D3GQ6DHY5 549 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TBC1D3CQ6IPX1 549 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 NEK5Q6P3R8 708 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 ERN2Q76MJ5 926 aaKnown RBP18.11■□□□□ 0.49
NCSTN-208ENST00000438008 RHOT2Q8IXI1 618 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TBC1D3Q8IZP1 549 aaPredicted RBP18.11■□□□□ 0.49
NCSTN-208ENST00000438008 NPWQ8N729 165 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 SLC35G2Q8TBE7 412 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 VOPP1Q96AW1 172 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 CSPG4P5Q96PW8 444 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 EBF2Q9HAK2 575 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 PREBQ9HCU5 417 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 TM9SF3Q9HD45 589 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 DYRK4Q9NR20 520 aa18.11■□□□□ 0.49
NCSTN-208ENST00000438008 RCOR3Q9P2K3 495 aaPredicted RBP18.11■□□□□ 0.49
NCSTN-208ENST00000438008 PCDH15Q96QU1 1955 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 J3KR12 359 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 AMPD1P23109 780 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 ITGB7P26010 798 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 NUDT1P36639 197 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 ARHGAP25P42331 645 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 MAPK8P45983 427 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 GRIA4P48058 902 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 ARSEP51690 589 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 ATXN3P54252 364 aaPredicted RBP18.1■□□□□ 0.49
NCSTN-208ENST00000438008 RACK1P63244 317 aaKnown RBP18.1■□□□□ 0.49
NCSTN-208ENST00000438008 GRIK2Q13002 908 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 CYTH1Q15438 398 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 TRIM69Q86WT6 500 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 GDAP1L1Q96MZ0 367 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 GTPBP2Q9BX10 602 aaKnown RBP18.1■□□□□ 0.49
NCSTN-208ENST00000438008 OSBPL1AQ9BXW6 950 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 DNAAF2Q9NVR5 837 aaKnown RBP18.1■□□□□ 0.49
NCSTN-208ENST00000438008 UBA2Q9UBT2 640 aaPredicted RBP18.1■□□□□ 0.49
NCSTN-208ENST00000438008 MFHAS1Q9Y4C4 1052 aa18.1■□□□□ 0.49
NCSTN-208ENST00000438008 LCA5LO95447 670 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms