RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 TRIM31Q9BZY9 425 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 TP63Q9H3D4 680 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 PDE11AQ9HCR9 933 aa3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 LIN7CQ9NUP9 197 aaKnown RBP3.39□□□□□ -1.87
HMGB1P31-201ENST00000437242 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 A0A1B0GVM2 712 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 GRM8O00222 908 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 TULP2O00295 520 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 APAF1O14727 1248 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 PMM2O15305 246 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 DNPH1O43598 174 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 DDAH2O95865 285 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 LDLRP01130 860 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 TM4SF4P48230 202 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 HSPA7P48741 367 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 MPEG1Q2M385 716 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 BTBD16Q32M84 506 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 GDPD4Q6W3E5 623 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 GATAD2AQ86YP4 633 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 ZNF114Q8NC26 417 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 TAF15Q92804 592 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 KCNJ9Q92806 393 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 MMP28Q9H239 520 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 SLC39A10Q9ULF5 831 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 OSGIN2Q9Y236 505 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 SLC45A1Q9Y2W3 748 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 PCDHA10Q9Y5I2 948 aa3.38□□□□□ -1.87
HMGB1P31-201ENST00000437242 MST1RQ04912 1400 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 DDTLA6NHG4 134 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 ASNA1O43681 348 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 CH25HO95992 272 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 IFIT2P09913 472 aaKnown RBP3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 RPL3P39023 403 aaKnown RBP3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 AK2P54819 239 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 PHEXP78562 749 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 CDK18Q07002 472 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 ST3GAL1Q11201 340 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 DMP1Q13316 513 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 ALKBH1Q13686 389 aaKnown RBP3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 BRD3Q15059 726 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 RBBP5Q15291 538 aaKnown RBP3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 TBRG1Q3YBR2 411 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 TMEM268Q5VZI3 342 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 MTFR2Q6P444 385 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 RHBDF2Q6PJF5 856 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 UNQ6126/PRO20091Q6UXV3 157 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 TRMT1LQ7Z2T5 733 aaKnown RBP3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 RFWD2Q8NHY2 731 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 CTCFLQ8NI51 663 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 SORCS1Q8WY21 1168 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 C18orf8Q96DM3 657 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 FEM1CQ96JP0 617 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 RIPOR3Q96MK2 946 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 C1QTNF5Q9BXJ0 243 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 CADM1Q9BY67 442 aaKnown RBP3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 EVA1AQ9H8M9 152 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 LZTS1Q9Y250 596 aa3.37□□□□□ -1.87
HMGB1P31-201ENST00000437242 NCAPD3P42695 1498 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 ATAD2BQ9ULI0 1458 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 NPIPB13A6NJU9 1138 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 NPIPB5A8MRT5 1133 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 RASA4BC9J798 803 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 NPIPB4C9JG80 1138 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 RASA4O43374 803 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 KIF1CO43896 1103 aaKnown RBP3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 CCNT1O60563 726 aaKnown RBP3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 ZG16O60844 167 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 MYL3P08590 195 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 HTR3AP46098 478 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 RHBDL3P58872 404 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 TROAPQ12815 778 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 DHX34Q14147 1143 aaKnown RBP3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 CALCRLQ16602 461 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 IL31Q6EBC2 164 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 NCAPH2Q6IBW4 605 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 NEK10Q6ZWH5 1172 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 TUBA1AQ71U36 451 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 TRIM74Q86UV6 250 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 TRIM73Q86UV7 250 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 RBFAQ8N0V3 343 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 MAB21L3Q8N8X9 362 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 IL17RCQ8NAC3 791 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 MUL1Q969V5 352 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 MTBPQ96DY7 904 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 SLC39A13Q96H72 371 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 TNIP3Q96KP6 325 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 ZNF385AQ96PM9 386 aaKnown RBP3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 DUX3Q96PT4 197 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 TEFMQ96QE5 360 aaKnown RBP3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 TUBA1CQ9BQE3 449 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 STK33Q9BYT3 514 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 NPFFR1Q9GZQ6 430 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 CERS4Q9HA82 394 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 UBTD1Q9HAC8 227 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 CLK4Q9HAZ1 481 aaKnown RBP3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 HERC5Q9UII4 1024 aaKnown RBP3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 PHTF1Q9UMS5 762 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 GAB2Q9UQC2 676 aa3.36□□□□□ -1.87
HMGB1P31-201ENST00000437242 PCDHGB2Q9Y5G2 931 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms