RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 PROSCO94903 275 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 GSRP00390 522 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 CTSLP07711 333 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 RARAP10276 462 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 TCF4P15884 667 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 SSR1P43307 286 aaKnown RBP16.55■□□□□ 0.24
SMPD4-207ENST00000435455 CCNHP51946 323 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-207ENST00000435455 METAP1P53582 386 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 SNRPD1P62314 119 aaKnown RBP16.55■□□□□ 0.24
SMPD4-207ENST00000435455 SLC25A11Q02978 314 aaKnown RBP16.55■□□□□ 0.24
SMPD4-207ENST00000435455 DPYSQ14117 519 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 KCNT1Q5JUK3 1230 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 ERMP1Q7Z2K6 904 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 DGLUCYQ7Z3D6 616 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 GAS2L3Q86XJ1 694 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 LZTR1Q8N653 840 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 TC2NQ8N9U0 490 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 C1orf216Q8TAB5 229 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 HSPH1Q92598 858 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 TM6SF2Q9BZW4 377 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 KLC2Q9H0B6 622 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 OSGEPQ9NPF4 335 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 ACTL7AQ9Y615 435 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 WASF2Q9Y6W5 498 aa16.55■□□□□ 0.24
SMPD4-207ENST00000435455 ASCC3Q8N3C0 2202 aaKnown RBP16.55■□□□□ 0.24
SMPD4-207ENST00000435455 TBC1D3DA0A087WVF3 549 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 TBC1D3IA0A087WXS9 549 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 TBC1D3EA0A087X179 549 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 TBC1D3KA0A087X1G2 549 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 TBC1D3FA6NER0 549 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-207ENST00000435455 TBC1D3LB9A6J9 549 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 PLK4O00444 970 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 CDX4O14627 284 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-207ENST00000435455 LEFTY1O75610 366 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 TMCC1O94876 653 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 IGHV4-34P06331 123 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 TBC1D3HP0C7X1 549 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 NUDT1P36639 197 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 AFF3P51826 1226 aaKnown RBP16.54■□□□□ 0.24
SMPD4-207ENST00000435455 POM121L1PQ3SYA9 428 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 ARSIQ5FYB1 569 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 AGBL4Q5VU57 503 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 TBC1D3GQ6DHY5 549 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 TBC1D3CQ6IPX1 549 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 LEKR1Q6ZMV7 388 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 POLNQ7Z5Q5 900 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 RHOT2Q8IXI1 618 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 TBC1D3Q8IZP1 549 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-207ENST00000435455 OR2AP1Q8NGE2 309 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 GRIN3AQ8TCU5 1115 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 CELF6Q96J87 481 aaKnown RBP16.54■□□□□ 0.24
SMPD4-207ENST00000435455 LRIG1Q96JA1 1093 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 ANP32EQ9BTT0 268 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 HDAC8Q9BY41 377 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 ZDHHC6Q9H6R6 413 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 HECAQ9UBI9 543 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-207ENST00000435455 UBA2Q9UBT2 640 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-207ENST00000435455 INTUQ9ULD6 942 aa16.54■□□□□ 0.24
SMPD4-207ENST00000435455 PLXNA2O75051 1894 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 A0A1W2PPC4 97 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 C10orf142B7Z368 130 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 PRAMEF11O60813 436 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 POP4O95707 220 aaKnown RBP16.53■□□□□ 0.24
SMPD4-207ENST00000435455 IGSF6O95976 241 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 MAN1A1P33908 653 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 MAPK8P45983 427 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 PAPOLAP51003 745 aaKnown RBP16.53■□□□□ 0.24
SMPD4-207ENST00000435455 CDH6P55285 790 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 RHOAP61586 193 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 RAD51Q06609 339 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 KRT81Q14533 505 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 TEAD4Q15561 434 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 AFMIDQ63HM1 303 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 TXNRD3NBQ6F5E7 133 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 ERN2Q76MJ5 926 aaKnown RBP16.53■□□□□ 0.24
SMPD4-207ENST00000435455 ARHGAP12Q8IWW6 846 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 CCDC170Q8IYT3 715 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 RYBPQ8N488 228 aaPredicted RBP16.53■□□□□ 0.24
SMPD4-207ENST00000435455 ARRDC3Q96B67 414 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 GDAP1L1Q96MZ0 367 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 CSPG4P5Q96PW8 444 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 GTPBP2Q9BX10 602 aaKnown RBP16.53■□□□□ 0.24
SMPD4-207ENST00000435455 SLC39A8Q9C0K1 460 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 PCDH18Q9HCL0 1135 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 PREBQ9HCU5 417 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 TM9SF3Q9HD45 589 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 RCOR3Q9P2K3 495 aaPredicted RBP16.53■□□□□ 0.24
SMPD4-207ENST00000435455 DNAH14Q0VDD8 3507 aa16.53■□□□□ 0.24
SMPD4-207ENST00000435455 DCDC2BA2VCK2 349 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 TM4SF5O14894 197 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 LATO43561 262 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 KRT7P08729 469 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 ITGB7P26010 798 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 GRIA4P48058 902 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 NEK3P51956 506 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 GRIK2Q13002 908 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 MYLK3Q32MK0 819 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 PIP5KL1Q5T9C9 394 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 TMCO3Q6UWJ1 677 aa16.52■□□□□ 0.24
SMPD4-207ENST00000435455 TRIM69Q86WT6 500 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms