RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 NAPRTQ6XQN6 538 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 RIPOR1Q6ZS17 1223 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 SPATA31D4Q6ZUB0 917 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 ARHGAP22Q7Z5H3 698 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 GLT1D1Q96MS3 346 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 IPO11Q9UI26 975 aaKnown RBP15.81■□□□□ 0.12
SCARF1-203ENST00000434376 EMCNQ9ULC0 261 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 HBS1LQ9Y450 684 aaKnown RBP15.81■□□□□ 0.12
SCARF1-203ENST00000434376 PLXNA1Q9UIW2 1896 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 PLIN3O60664 434 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 CCNFP41002 786 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 HSF5Q4G112 596 aaPredicted RBP15.81■□□□□ 0.12
SCARF1-203ENST00000434376 PHTF2Q8N3S3 785 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 KLHDC9Q8NEP7 349 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 URGCPQ8TCY9 931 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 MTBPQ96DY7 904 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 ANGPTL2Q9UKU9 493 aa15.81■□□□□ 0.12
SCARF1-203ENST00000434376 PROCP04070 461 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 LYNP07948 512 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 PRSS56P0CW18 603 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 HOXD8P13378 290 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-203ENST00000434376 TPSB2P20231 275 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 SEMG2Q02383 582 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 SLC10A7Q0GE19 358 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 TPSAB1Q15661 275 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 USP13Q92995 863 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-203ENST00000434376 FBXO32Q969P5 355 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 SP110Q9HB58 689 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 SAR1AQ9NR31 198 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 TLL2Q9Y6L7 1015 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 PLXNB2O15031 1838 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-203ENST00000434376 HLA-DQB2P05538 268 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 LRPAP1P30533 357 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 CCR1P32246 355 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 SPRP35270 261 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-203ENST00000434376 TUSC3Q13454 348 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 GRAMD1BQ3KR37 738 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 SERINC5Q86VE9 423 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 CHSY1Q86X52 802 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 DBF4BQ8NFT6 615 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 PSMG2Q969U7 264 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 UBE2OQ9C0C9 1292 aaKnown RBP15.8■□□□□ 0.12
SCARF1-203ENST00000434376 MOCS1Q9NZB8 636 aa15.8■□□□□ 0.12
SCARF1-203ENST00000434376 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-203ENST00000434376 SPECC1L-ADORA2AF8WAN1 911 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 PGM3O95394 542 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 GALNT3Q14435 633 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 TAF12Q16514 161 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 LPCAT4Q643R3 524 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 SH2D5Q6ZV89 423 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 C16orf59Q7L2K0 433 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 SCUBE1Q8IWY4 988 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 DCBLD1Q8N8Z6 715 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 ERLEC1Q96DZ1 483 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 OCEL1Q9H607 264 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 RHBDL2Q9NX52 303 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 AP2A1O95782 977 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 MX2P20592 715 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 DSG1Q02413 1049 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 TMEM173Q86WV6 379 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-203ENST00000434376 SOCS4Q8WXH5 440 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 NXNL1Q96CM4 212 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 CATSPER2Q96P56 530 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 GPR62Q9BZJ7 368 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 WWP1Q9H0M0 922 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 SARS2Q9NP81 518 aaKnown RBP15.79■□□□□ 0.12
SCARF1-203ENST00000434376 CLIC5Q9NZA1 410 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 TET1Q8NFU7 2136 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 UBA6A0AVT1 1052 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-203ENST00000434376 SEPT4O43236 478 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 ANPEPP15144 967 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 KCNQ1P51787 676 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 TAF10Q12962 218 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 PCLAFQ15004 111 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 CTC1Q2NKJ3 1217 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 PPM1LQ5SGD2 360 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 RBM20Q5T481 1227 aaKnown RBP15.79■□□□□ 0.12
SCARF1-203ENST00000434376 RTN4RL1Q86UN2 441 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-203ENST00000434376 ST13P5Q8NFI4 369 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-203ENST00000434376 SLC45A3Q96JT2 553 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 CCSER2Q9H7U1 834 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 PPM1HQ9ULR3 514 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 ASB3Q9Y575 518 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 PRUNE2Q8WUY3 3088 aa15.79■□□□□ 0.12
SCARF1-203ENST00000434376 A0A0U1RQF3 1178 aa15.78■□□□□ 0.12
SCARF1-203ENST00000434376 NCF1BA6NI72 391 aaPredicted RBP15.78■□□□□ 0.12
SCARF1-203ENST00000434376 NCF1CA8MVU1 366 aaPredicted RBP15.78■□□□□ 0.12
SCARF1-203ENST00000434376 NCF1P14598 390 aaPredicted RBP15.78■□□□□ 0.12
SCARF1-203ENST00000434376 CNSTQ6PJW8 725 aa15.78■□□□□ 0.12
SCARF1-203ENST00000434376 EFHBQ8N7U6 833 aa15.78■□□□□ 0.12
SCARF1-203ENST00000434376 PIWIL2Q8TC59 973 aaKnown RBP15.78■□□□□ 0.12
SCARF1-203ENST00000434376 MAPK15Q8TD08 544 aa15.78■□□□□ 0.12
SCARF1-203ENST00000434376 PHACTR1Q9C0D0 580 aa15.78■□□□□ 0.12
SCARF1-203ENST00000434376 GLRA3O75311 464 aa15.78■□□□□ 0.12
SCARF1-203ENST00000434376 AHSGP02765 367 aa15.78■□□□□ 0.12
SCARF1-203ENST00000434376 ACVRL1P37023 503 aa15.78■□□□□ 0.12
SCARF1-203ENST00000434376 BTKQ06187 659 aa15.78■□□□□ 0.12
SCARF1-203ENST00000434376 SLC9B1Q4ZJI4 515 aa15.78■□□□□ 0.12
SCARF1-203ENST00000434376 HABP4Q5JVS0 413 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms