RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 C8orf48Q96LL4 319 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 NPFFR1Q9GZQ6 430 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 UPB1Q9UBR1 384 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 KLQ9UEF7 1012 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 DAPP1Q9UN19 280 aa3.94□□□□□ -1.78
PTPN4-205ENST00000433888 SAA2-SAA4A0A096LPE2 208 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 TARSL2A2RTX5 802 aaKnown RBP3.93□□□□□ -1.78
PTPN4-205ENST00000433888 GOLGA6L3A6NEY3 463 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 PNLIPRP1P54315 467 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 ACSM2AQ08AH3 577 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 SETMARQ53H47 684 aaPredicted RBP3.93□□□□□ -1.78
PTPN4-205ENST00000433888 C9orf139Q6ZV77 190 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 GALNT7Q86SF2 657 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 PGBD5Q8N414 524 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 POC1AQ8NBT0 407 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 SORCS1Q8WY21 1168 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 TAF15Q92804 592 aaKnown RBP eCLIP3.93□□□□□ -1.78
PTPN4-205ENST00000433888 BICD1Q96G01 975 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 SCMH1Q96GD3 660 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 TXNDC15Q96J42 360 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 PGLYRP2Q96PD5 576 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 TEFMQ96QE5 360 aaKnown RBP3.93□□□□□ -1.78
PTPN4-205ENST00000433888 PIGSQ96S52 555 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 RTKNQ9BST9 563 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 LHPPQ9H008 270 aa3.93□□□□□ -1.78
PTPN4-205ENST00000433888 SEPSECSQ9HD40 501 aaKnown RBP3.93□□□□□ -1.78
PTPN4-205ENST00000433888 LMX1BO60663 402 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 AFPP02771 609 aaKnown RBP3.92□□□□□ -1.78
PTPN4-205ENST00000433888 ARSAP15289 507 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 CHN1P15882 459 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 HDAC1Q13547 482 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-205ENST00000433888 HLTFQ14527 1009 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPN4-205ENST00000433888 ATPAF1Q5TC12 328 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-205ENST00000433888 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 EXOC3L1Q86VI1 746 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 TMC8Q8IU68 726 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 DCUN1D3Q8IWE4 304 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 CCAR1Q8IX12 1150 aaKnown RBP3.92□□□□□ -1.78
PTPN4-205ENST00000433888 PTGR2Q8N8N7 351 aaPredicted RBP3.92□□□□□ -1.78
PTPN4-205ENST00000433888 SCAMP5Q8TAC9 235 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 WBP2Q969T9 261 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 KATNAL1Q9BW62 490 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 IFT27Q9BW83 186 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 METTL14Q9HCE5 456 aaKnown RBP3.92□□□□□ -1.78
PTPN4-205ENST00000433888 OBP2BQ9NPH6 170 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 CHST12Q9NRB3 414 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 NFS1Q9Y697 457 aa3.92□□□□□ -1.78
PTPN4-205ENST00000433888 FAM90A20PA6NIJ5 464 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 KDM4EB2RXH2 506 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-205ENST00000433888 HNRNPRO43390 633 aaKnown RBP3.91□□□□□ -1.78
PTPN4-205ENST00000433888 PARNO95453 639 aaKnown RBP3.91□□□□□ -1.78
PTPN4-205ENST00000433888 CKMT1AP12532 417 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 DCTDP32321 178 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 CRIP2P52943 208 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-205ENST00000433888 CEP85LQ5SZL2 805 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 STPG1Q5TH74 334 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 ADAM5Q6NVV9 412 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 RHBDF2Q6PJF5 856 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 SLC44A2Q8IWA5 706 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-205ENST00000433888 SCAIQ8N9R8 606 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 OR4N2Q8NGD1 307 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 SNED1Q8TER0 1413 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 MYD88Q99836 296 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 PRDM8Q9NQV8 689 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 GRHL1Q9NZI5 618 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 MALT1Q9UDY8 824 aa3.91□□□□□ -1.78
PTPN4-205ENST00000433888 C19orf53Q9UNZ5 99 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-205ENST00000433888 MORC2Q9Y6X9 1032 aaPredicted RBP3.91□□□□□ -1.78
PTPN4-205ENST00000433888 LGALS16A8MUM7 142 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 J3KR12 359 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 XPNPEP2O43895 674 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 CYP4B1P13584 511 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 FMO4P31512 558 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 RPS6KA3P51812 740 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 CYP4A11Q02928 519 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 LRRC24Q50LG9 513 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 XKR9Q5GH70 373 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 FAM69BQ5VUD6 431 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 DGAT2L7PQ6IED9 249 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 TYW3Q6IPR3 259 aaKnown RBP3.9□□□□□ -1.79
PTPN4-205ENST00000433888 RAB11FIP2Q7L804 512 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 BRSK2Q8IWQ3 736 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 ANKRD44Q8N8A2 993 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 RFWD2Q8NHY2 731 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 BRD8Q9H0E9 1235 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 PABPC3Q9H361 631 aaKnown RBP3.9□□□□□ -1.79
PTPN4-205ENST00000433888 ELAC1Q9H777 363 aaKnown RBP3.9□□□□□ -1.79
PTPN4-205ENST00000433888 MVB12BQ9H7P6 319 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 ACAD9Q9H845 621 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 HERC5Q9UII4 1024 aaKnown RBP3.9□□□□□ -1.79
PTPN4-205ENST00000433888 CDC23Q9UJX2 597 aa3.9□□□□□ -1.79
PTPN4-205ENST00000433888 FAM157AC9JC47 383 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 CHL1O00533 1208 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 TIMM23O14925 209 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 ACTL6BO94805 426 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 ACP5P13686 325 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 AMD1P17707 334 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 ANOS1P23352 680 aa3.89□□□□□ -1.79
PTPN4-205ENST00000433888 PPM1AP35813 382 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms