RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PPP1R3AQ16821 1122 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 MAP1SQ66K74 1059 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 REP15Q6BDI9 236 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 C4orf22Q6V702 233 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 CAMK1DQ8IU85 385 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 CPSF7Q8N684 471 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 C7orf31Q8N865 590 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 RDM1Q8NG50 284 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 MAGEE2Q8TD90 523 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 TRIM8Q9BZR9 551 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 WARS2Q9UGM6 360 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 CNOT3O75175 753 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 HOXC6P09630 235 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 EEF1DP29692 281 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 CD151P48509 253 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 SPIDRQ14159 915 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 GRM3Q14832 879 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 ZNF618Q5T7W0 954 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 PPP4R4Q6NUP7 873 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 MAMDC4Q6UXC1 1216 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 ABHD15Q6UXT9 468 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 TTC30AQ86WT1 665 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 TNIP2Q8NFZ5 429 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 TANKQ92844 425 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 P2RY11Q96G91 374 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 PPP1R16BQ96T49 567 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 UBP1Q9NZI7 540 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 KLHL8Q9P2G9 620 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 SUCOQ9UBS9 1254 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 A8MU76 341 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 RGS20O76081 388 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 MPOP05164 745 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 C8BP07358 591 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 NFICP08651 508 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 HSPA8P11142 646 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 NDST1P52848 882 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 POU5F1BQ06416 359 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 VPS72Q15906 364 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 CERCAMQ5T4B2 595 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 PMF1Q6P1K2 205 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 CYS1Q717R9 158 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 FSTL5Q8N475 847 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 SHCBP1Q8NEM2 672 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 VPS39Q96JC1 886 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 ZNF670Q9BS34 389 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 CACNA2D2Q9NY47 1150 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 OAZ3Q9UMX2 235 aa11.7□□□□□ -0.54
HMGCS1-202ENST00000433297 LOXHD1Q8IVV2 1947 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 KRBA1A5PL33 1030 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 NEMP2A6NFY4 417 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 H0YJX3 145 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 CAPNS1P04632 268 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 ALDH2P05091 517 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 PRKCBP05771 671 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 GJB1P08034 283 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 MATN1P21941 496 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 JAK1P23458 1154 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 LRPAP1P30533 357 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 ARL2P36404 184 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 PCYT1AP49585 367 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 NFATC3Q12968 1075 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 CARTPTQ16568 116 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 ZIK1Q3SY52 487 aaPredicted RBP11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 FAM131BQ86XD5 332 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 TP53INP2Q8IXH6 220 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 CHPT1Q8WUD6 406 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 ACDQ96AP0 544 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 CSPG4P5Q96PW8 444 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 CHRAC1Q9NRG0 131 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 BFARQ9NZS9 450 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 XPR1Q9UBH6 696 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 CROTQ9UKG9 612 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 TMED5Q9Y3A6 229 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 B4GALT5O43286 388 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 BAIAP3O94812 1187 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 DDHD2O94830 711 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 PIGRP01833 764 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 SUPT20HL2P0C7V6 817 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 NCAM1P13591 858 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 TSPAN8P19075 237 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 PLK1P53350 603 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 SP2Q02086 613 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 GOLGA7BQ2TAP0 167 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 SUPT20HL1Q3ZLR7 823 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 STYK1Q6J9G0 422 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 BTLAQ7Z6A9 289 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 PDZD8Q8NEN9 1154 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 CLEC4CQ8WTT0 213 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 NGLY1Q96IV0 654 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 QKIQ96PU8 341 aaKnown RBP eCLIP11.69□□□□□ -0.544e-11■■■□□ 15.5
HMGCS1-202ENST00000433297 HERC2P3Q9BVR0 1158 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 MRPL40Q9NQ50 206 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 TMPRSS4Q9NRS4 437 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 ATAD3AQ9NVI7 634 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 VTI1BQ9UEU0 232 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 IPO11Q9UI26 975 aaKnown RBP11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 SYNPO2Q9UMS6 1093 aa11.69□□□□□ -0.54
HMGCS1-202ENST00000433297 TOR1BO14657 336 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms