RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 ZBTB16Q05516 673 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 PRKD1Q15139 912 aaPredicted RBP14.62□□□□□ -0.07
CSTF3-202ENST00000431742 CST6Q15828 149 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 HS1BP3Q53T59 392 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 CARD16Q5EG05 197 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 HEATR6Q6AI08 1181 aaKnown RBP14.62□□□□□ -0.07
CSTF3-202ENST00000431742 TIGD7Q6NT04 549 aaPredicted RBP14.62□□□□□ -0.07
CSTF3-202ENST00000431742 DPY19L3Q6ZPD9 716 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 BZW1Q7L1Q6 419 aaKnown RBP14.62□□□□□ -0.07
CSTF3-202ENST00000431742 TEX26Q8N6G2 289 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 CHST14Q8NCH0 376 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 OR8D1Q8WZ84 308 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 P3H4Q92791 437 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 CCDC114Q96M63 670 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 GDAP1L1Q96MZ0 367 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 PSKH2Q96QS6 385 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 LGMNQ99538 433 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 TPSD1Q9BZJ3 242 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 TM6SF2Q9BZW4 377 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 BRD8Q9H0E9 1235 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 ZSCAN32Q9NX65 697 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 USP36Q9P275 1121 aaKnown RBP14.62□□□□□ -0.07
CSTF3-202ENST00000431742 BCCIPQ9P287 314 aaKnown RBP eCLIP14.62□□□□□ -0.07
CSTF3-202ENST00000431742 SEPT3Q9UH03 358 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 PPM1HQ9ULR3 514 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 PCDHGA2Q9Y5H1 932 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 WASF2Q9Y6W5 498 aa14.62□□□□□ -0.07
CSTF3-202ENST00000431742 KCNK3O14649 394 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 ENC1O14682 589 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 PPP1R12AO14974 1030 aaPredicted RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 MUSKO15146 869 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 LILRB5O75023 590 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 IGSF6O95976 241 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 IGLV3-19P01714 112 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 MSNP26038 577 aaKnown RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 HSPA9P38646 679 aaKnown RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 RECQLP46063 649 aaPredicted RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 RGRP47804 291 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 CSNK1DP48730 415 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 SNRPD1P62314 119 aaKnown RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 IFI35P80217 286 aaPredicted RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 HNRNPDQ14103 355 aaKnown RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 NOMO1Q15155 1222 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 MAP7D1Q3KQU3 841 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 ATXN7L2Q5T6C5 722 aaPredicted RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 SEL1L2Q5TEA6 688 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 KIAA1324Q6UXG2 1013 aaKnown RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 DSG4Q86SJ6 1040 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 CCDC13Q8IYE1 715 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 ABCA7Q8IZY2 2146 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 C17orf53Q8N3J3 647 aaPredicted RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 PGBD5Q8N414 524 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 TSEN2Q8NCE0 465 aaKnown RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 ACTL9Q8TC94 416 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 LRRN4Q8WUT4 740 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 PRCCQ92733 491 aaPredicted RBP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 HAUS1Q96CS2 278 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 SIPA1Q96FS4 1042 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 QKIQ96PU8 341 aaKnown RBP eCLIP14.61□□□□□ -0.07
CSTF3-202ENST00000431742 SARDHQ9UL12 918 aa14.61□□□□□ -0.07
CSTF3-202ENST00000431742 LRRK1Q38SD2 2015 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 TCRBV7S2A1N4TA0A589 114 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 H0Y858 1186 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 RNF103O00237 685 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 ZBTB24O43167 697 aaPredicted RBP14.6□□□□□ -0.07
CSTF3-202ENST00000431742 BNIP3LO60238 219 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 RNASEH1O60930 286 aaKnown RBP14.6□□□□□ -0.07
CSTF3-202ENST00000431742 ADH1BP00325 375 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 ATP1A1P05023 1023 aaKnown RBP14.6□□□□□ -0.07
CSTF3-202ENST00000431742 CR2P20023 1033 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 CHRNA3P32297 505 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 P2RY2P41231 377 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 MMP13P45452 471 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 PSMD8P48556 350 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 PTPN5P54829 565 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 OTUD4Q01804 1114 aaKnown RBP14.6□□□□□ -0.07
CSTF3-202ENST00000431742 NSUN2Q08J23 767 aaKnown RBP eCLIP14.6□□□□□ -0.07
CSTF3-202ENST00000431742 XRCC4Q13426 336 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 ZNF235Q14590 738 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 MARC1Q5VT66 337 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 ALG1LQ6GMV1 187 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 CACUL1Q86Y37 369 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 SLC13A5Q86YT5 568 aaPredicted RBP14.6□□□□□ -0.07
CSTF3-202ENST00000431742 MMAAQ8IVH4 418 aaKnown RBP14.6□□□□□ -0.07
CSTF3-202ENST00000431742 PGBD3Q8N328 593 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 CCNYQ8ND76 341 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 TMIEQ8NEW7 156 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 OR6K2Q8NGY2 324 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 NSMCE1Q8WV22 266 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 FAM131CQ96AQ9 280 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 LRIG1Q96JA1 1093 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 EXOC2Q96KP1 924 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 IL12RB2Q99665 862 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 MGME1Q9BQP7 344 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 HEPHQ9BQS7 1158 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 CINPQ9BW66 212 aaPredicted RBP14.6□□□□□ -0.07
CSTF3-202ENST00000431742 PABPC3Q9H361 631 aaKnown RBP14.6□□□□□ -0.07
CSTF3-202ENST00000431742 CD93Q9NPY3 652 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 ITM2CQ9NQX7 267 aa14.6□□□□□ -0.07
CSTF3-202ENST00000431742 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms