RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 GOLGA6AQ9NYA3 693 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 UBA2Q9UBT2 640 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-206ENST00000431390 VPS28Q9UK41 221 aa18.55■□□□□ 0.56
HMGN1-206ENST00000431390 MYO10Q9HD67 2058 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 CXorf51AA0A1B0GTR3 108 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 E7ESA3 106 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 MAP2K7O14733 419 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 PSMD3O43242 534 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 PLK1P53350 603 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 LMAN2Q12907 356 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 EML3Q32P44 896 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 LY6G5CQ5SRR4 150 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 PDIK1LQ8N165 341 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 LMLNQ96KR4 655 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 PWWP2AQ96N64 755 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 MYADMQ96S97 322 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 C2orf49Q9BVC5 232 aaPredicted RBP18.54■□□□□ 0.56
HMGN1-206ENST00000431390 SLC2A11Q9BYW1 496 aa18.54■□□□□ 0.56
HMGN1-206ENST00000431390 THG1LQ9NWX6 298 aaKnown RBP18.54■□□□□ 0.56
HMGN1-206ENST00000431390 AAR2Q9Y312 384 aaKnown RBP18.54■□□□□ 0.56
HMGN1-206ENST00000431390 NEDD8-MDP1E9PL57 170 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 GOLGA8MH3BSY2 632 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 CBX4O00257 560 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 ZMPSTE24O75844 475 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 ANXA9O76027 345 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 SUN1O94901 812 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 AP2A1O95782 977 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 TYRP14679 529 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 GAD2Q05329 585 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 ZNF235Q14590 738 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 DHCR24Q15392 516 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 KCTD11Q693B1 232 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 TRMT10CQ7L0Y3 403 aaKnown RBP18.53■□□□□ 0.56
HMGN1-206ENST00000431390 PDCD7Q8N8D1 485 aaKnown RBP18.53■□□□□ 0.56
HMGN1-206ENST00000431390 TSEN2Q8NCE0 465 aaKnown RBP18.53■□□□□ 0.56
HMGN1-206ENST00000431390 ACDQ96AP0 544 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 SERPINB12Q96P63 405 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 SLC25A51Q9H1U9 297 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 POMKQ9H5K3 350 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 XAB2Q9HCS7 855 aaKnown RBP18.53■□□□□ 0.56
HMGN1-206ENST00000431390 NT5MQ9NPB1 228 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 SEPT3Q9UH03 358 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 CLEC4EQ9ULY5 219 aa18.53■□□□□ 0.56
HMGN1-206ENST00000431390 GFRA3O60609 400 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 NFATC1O95644 943 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 ADH1CP00326 375 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 MLNP12872 115 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 GLDCP23378 1020 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 AVPR2P30518 371 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 HSD17B3P37058 310 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 GEMIN4P57678 1058 aaKnown RBP18.52■□□□□ 0.56
HMGN1-206ENST00000431390 ARF5P84085 180 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 PDGFRLQ15198 375 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 INO80DQ53TQ3 878 aaPredicted RBP18.52■□□□□ 0.56
HMGN1-206ENST00000431390 SYCP2LQ5T4T6 812 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 TANGO2Q6ICL3 276 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 OTOP3Q7RTS5 596 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 MLPHQ9BV36 600 aaPredicted RBP18.52■□□□□ 0.56
HMGN1-206ENST00000431390 PABPC3Q9H361 631 aaKnown RBP18.52■□□□□ 0.56
HMGN1-206ENST00000431390 VPS51Q9UID3 782 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 TTLL3Q9Y4R7 772 aa18.52■□□□□ 0.56
HMGN1-206ENST00000431390 F5H423 210 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 ALOX15BO15296 676 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 HOXC11O43248 304 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 PDGFBP01127 241 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 CYP17A1P05093 508 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 LAMP2P13473 410 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 GBP2P32456 591 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 CD70P32970 193 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 MAGEA3P43357 314 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 GEMP55040 296 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 FCHO2Q0JRZ9 810 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 UAP1Q16222 522 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 PLEKHG6Q3KR16 790 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 FNBP1LQ5T0N5 605 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 ALG1LQ6GMV1 187 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 RETSATQ6NUM9 610 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 LRRC8BQ6P9F7 803 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 VITQ6UXI7 678 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 ZNF534Q76KX8 674 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 CAND1Q86VP6 1230 aaKnown RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 MFSD6LQ8IWD5 586 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 APCDD1Q8J025 514 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 UBLCP1Q8WVY7 318 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 ATP2A3Q93084 1043 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 ELSPBP1Q96BH3 223 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 IMP4Q96G21 291 aaKnown RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 PSKH2Q96QS6 385 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 CINPQ9BW66 212 aaPredicted RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 POLR1EQ9GZS1 481 aaKnown RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 CDC42EP4Q9H3Q1 356 aaKnown RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 LRRC40Q9H9A6 602 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 SAYSD1Q9NPB0 183 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 DNAJC17Q9NVM6 304 aaKnown RBP18.51■□□□□ 0.55
HMGN1-206ENST00000431390 SNAP91O60641 907 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 SASH3O75995 380 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 ADH5P11766 374 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 HLA-FP30511 346 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 MAGEA4P43358 317 aa18.51■□□□□ 0.55
HMGN1-206ENST00000431390 PDIA2Q13087 525 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms