RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	DMTF1	Q9Y222	760 aa		18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	FARP1	Q9Y4F1	1045 aa	Predicted RBP	18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	ARID1B	Q8NFD5	2236 aa	Predicted RBP	18.11	■□□□□ 0.49
MRPL28-203	ENST00000429738	SIGLEC16	A6NMB1	481 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	FAM72C	H0Y354	149 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	CBX4	O00257	560 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	LDOC1	O95751	146 aa	Predicted RBP	18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	CD160	O95971	181 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	PRNP	P04156	253 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	RHOQ	P17081	205 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	ITPKB	P27987	946 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	HNF1B	P35680	557 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	EIF2S3	P41091	472 aa	Known RBP	18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	SERPINH1	P50454	418 aa	Known RBP	18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	NXPH1	P58417	271 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	FAM72A	Q5TYM5	149 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	FAM72D	Q6L9T8	149 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	RETSAT	Q6NUM9	610 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	WDR59	Q6PJI9	974 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	DPY19L3	Q6ZPD9	716 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	FAM72B	Q86X60	149 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	CCDC185	Q8N715	623 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	MFSD2A	Q8NA29	543 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	FAM172A	Q8WUF8	416 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	SLC39A7	Q92504	469 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	ARRDC3	Q96B67	414 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	CNDP2	Q96KP4	475 aa	Known RBP	18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	AGPAT1	Q99943	283 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	SYT11	Q9BT88	431 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	SELENOO	Q9BVL4	669 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	MAGEB5	Q9BZ81	275 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	PRORY	Q9H606	182 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	ATP13A1	Q9HD20	1204 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	TMEM248	Q9NWD8	314 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	KALRN	O60229	2985 aa		18.1	■□□□□ 0.49
MRPL28-203	ENST00000429738	TEX33	O43247	280 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	RFPL3	O75679	317 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	LRIG2	O94898	1065 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	PRB1	P04280	392 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	ITGAV	P06756	1048 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	GPD1	P21695	349 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	MAPKAPK2	P49137	400 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	C1QBP	Q07021	282 aa	Known RBP	18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	ANO6	Q4KMQ2	910 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	NEK5	Q6P3R8	708 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	LRRC69	Q6ZNQ3	347 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	IQCH	Q86VS3	1027 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	DRC7	Q8IY82	874 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	PCDH20	Q8N6Y1	951 aa	Known RBP	18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	SAP25	Q8TEE9	199 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	SPON2	Q9BUD6	331 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	TNKS2	Q9H2K2	1166 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	ERVMER34-1	Q9H9K5	563 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	WASF2	Q9Y6W5	498 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	TRPM6	Q9BX84	2022 aa		18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	ASH1L	Q9NR48	2969 aa	Known RBP	18.09	■□□□□ 0.49
MRPL28-203	ENST00000429738	TLR4	O00206	839 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	KPNA3	O00505	521 aa	Predicted RBP	18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	ATXN7	O15265	892 aa	Predicted RBP	18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	YKT6	O15498	198 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	LEFTY1	O75610	366 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	PLEK	P08567	350 aa	Predicted RBP	18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	FER	P16591	822 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	MAT2A	P31153	395 aa	Known RBP	18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	ACVRL1	P37023	503 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	ETFB	P38117	255 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	RXRG	P48443	463 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	SEMG2	Q02383	582 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	DNAJC3	Q13217	504 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	SLC45A4	Q5BKX6	768 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	PPP1R15B	Q5SWA1	713 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	IRF2BP2	Q7Z5L9	587 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	LSM14A	Q8ND56	463 aa	Known RBP	18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	BAP1	Q92560	729 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	ARHGEF2	Q92974	986 aa	Known RBP	18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	TBC1D31	Q96DN5	1066 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	HDAC8	Q9BY41	377 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	NRSN2	Q9GZP1	204 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	NAT10	Q9H0A0	1025 aa	Known RBP	18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	RTN4	Q9NQC3	1192 aa	Known RBP	18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	GDF3	Q9NR23	364 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	IL36A	Q9UHA7	158 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	MYO6	Q9UM54	1294 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	ACTL7A	Q9Y615	435 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	AK5	Q9Y6K8	562 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	MYLK	Q15746	1914 aa		18.08	■□□□□ 0.48
MRPL28-203	ENST00000429738	RRP8	O43159	456 aa	Known RBP	18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	CCP110	O43303	1012 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	TLX3	O43711	291 aa	Predicted RBP	18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	ZNF143	P52747	638 aa	Predicted RBP	18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	CLDN6	P56747	220 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	CCDC15	Q0P6D6	951 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	OVGP1	Q12889	678 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	TARDBP	Q13148	414 aa	Known RBP eCLIP	18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	RTP5	Q14D33	572 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	SETMAR	Q53H47	684 aa	Predicted RBP	18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	ARSI	Q5FYB1	569 aa		18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	RWDD4	Q6NW29	188 aa	Known RBP	18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	ERN2	Q76MJ5	926 aa	Known RBP	18.07	■□□□□ 0.48
MRPL28-203	ENST00000429738	SPATS2	Q86XZ4	545 aa	Known RBP	18.07	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms